RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 TUBB2BQ9BVA1 445 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 FRMD8P1Q9BZ68 369 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 CIPCQ9C0C6 399 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 RAB33BQ9H082 229 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SLC25A18Q9H1K4 315 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SLC26A1Q9H2B4 701 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PABPC3Q9H361 631 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 RMND5AQ9H871 391 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 MAGEE1Q9HCI5 957 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GJB4Q9NTQ9 266 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TUBGCP4Q9UGJ1 667 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 DBNLQ9UJU6 430 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 CDH7Q9ULB5 785 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SLC9A8Q9Y2E8 581 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 HBS1LQ9Y450 684 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 TIMM22Q9Y584 194 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SNX14Q9Y5W7 946 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PEG3Q9GZU2 1588 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 ELP1O95163 1332 aa3.96□□□□□ -1.77
SMG8-205ENST00000580798 TTC3P53804 2025 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 A0A1B0GTQ1 180 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 TMEM120BA0PK00 339 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ARHGAP42A6NI28 874 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 OR6C75A6NL08 312 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ZNF716A6NP11 495 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 BTBD19C9JJ37 291 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CTDSP2O14595 271 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 EIF3DO15371 548 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMG8-205ENST00000580798 RRP8O43159 456 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 PPIP5K2O43314 1243 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SMIM24O75264 130 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CRCPO75575 148 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 GCATO75600 419 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SURF6O75683 361 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 CDC123O75794 336 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 CBR3O75828 277 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 TOMM70O94826 608 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 VNN1O95497 513 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CH25HO95992 272 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 PDGFBP01127 241 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 KRT8P05787 483 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ZNF735P0CB33 412 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CALCBP10092 127 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 UROSP10746 265 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 DDX5P17844 614 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 MYF6P23409 242 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CFL1P23528 166 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 EPHA8P29322 1005 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 SFNP31947 248 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 GGT5P36269 586 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 PRKCIP41743 596 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ALDH3B1P43353 468 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ACADSBP45954 432 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CCR10P46092 362 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 NRIP1P48552 1158 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 POU3F4P49335 361 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 FHITP49789 147 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CLCNKAP51800 687 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 STAT2P52630 851 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 THOP1P52888 689 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 EIF3BP55884 814 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 UCP3P55916 312 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 PSMC6P62333 389 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 HTRA4P83105 476 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 PDE1BQ01064 536 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 E2F1Q01094 437 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 HYAL1Q12794 435 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 LCP2Q13094 533 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 FADDQ13158 208 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 MSLNQ13421 630 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 SNTB1Q13884 538 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 CAMK1Q14012 370 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 HERC3Q15034 1050 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMG8-205ENST00000580798 TWIST1Q15672 202 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 TSC22D1Q15714 1073 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CYP1B1Q16678 543 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 LY6KQ17RY6 165 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 KRT24Q2M2I5 525 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SMTNL2Q2TAL5 461 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ZIK1Q3SY52 487 aaPredicted RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 RNASE12Q5GAN4 147 aaKnown RBP3.96□□□□□ -1.78
SMG8-205ENST00000580798 RAB41Q5JT25 222 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 RAET1GQ6H3X3 334 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SHC4Q6S5L8 630 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SUSD1Q6UWL2 747 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 SERPINA13PQ6UXR4 307 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 KCTD9Q7L273 389 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 KRT28Q7Z3Y7 464 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 HAUS6Q7Z4H7 955 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 PHLDB2Q86SQ0 1253 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 BIVMQ86UB2 503 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 LRRC6Q86X45 466 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 MFN1Q8IWA4 741 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 FOXRED2Q8IWF2 684 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 C10orf67Q8IYJ2 551 aa3.96□□□□□ -1.78
SMG8-205ENST00000580798 CLYBLQ8N0X4 340 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms