RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
SS18-212ENST00000579061 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 CACNA2D3Q8IZS8 1091 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 NLGN4XQ8N0W4 816 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 IL22RA1Q8N6P7 574 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 ZSCAN1Q8NBB4 408 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 SIDT2Q8NBJ9 832 aaKnown RBP14.44□□□□□ -0.1
SS18-212ENST00000579061 NLGN4YQ8NFZ3 816 aaPredicted RBP14.44□□□□□ -0.1
SS18-212ENST00000579061 LCN9Q8WX39 176 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 CPT1BQ92523 772 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 BBC3Q96PG8 261 aaPredicted RBP14.44□□□□□ -0.1
SS18-212ENST00000579061 FCRL4Q96PJ5 515 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 MAP3K3Q99759 626 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 SRMSQ9H3Y6 488 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 XAB2Q9HCS7 855 aaKnown RBP14.44□□□□□ -0.1
SS18-212ENST00000579061 WDR70Q9NW82 654 aa14.44□□□□□ -0.1
SS18-212ENST00000579061 ATMQ13315 3056 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 IGHV5-51A0A0C4DH38 117 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 UBA6A0AVT1 1052 aaPredicted RBP14.43□□□□□ -0.1
SS18-212ENST00000579061 MAGEB16A2A368 324 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 STK17BO94768 372 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 RPS3P23396 243 aaKnown RBP eCLIP14.43□□□□□ -0.1
SS18-212ENST00000579061 SH3BP2P78314 561 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 ACY1Q03154 408 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 ABHD18Q0P651 414 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.43□□□□□ -0.1
SS18-212ENST00000579061 ANKRD22Q5VYY1 191 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 KIAA0930Q6ICG6 404 aaPredicted RBP14.43□□□□□ -0.1
SS18-212ENST00000579061 MRNIPQ6NTE8 343 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 VASH2Q86V25 355 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 CAND1Q86VP6 1230 aaKnown RBP14.43□□□□□ -0.1
SS18-212ENST00000579061 TBC1D21Q8IYX1 336 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 PHC3Q8NDX5 983 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 OR4E2Q8NGC2 313 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 OR52E1Q8NGJ3 308 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 TTC9Q92623 222 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 MFSD3Q96ES6 412 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 OR6C1Q96RD1 312 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 TCF12Q99081 682 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 EFHD1Q9BUP0 239 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 PDE7BQ9NP56 450 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 C1GALT1Q9NS00 363 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 MARCH4Q9P2E8 410 aaPredicted RBP14.43□□□□□ -0.1
SS18-212ENST00000579061 POLG2Q9UHN1 485 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 POMT2Q9UKY4 750 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 BTRCQ9Y297 605 aa14.43□□□□□ -0.1
SS18-212ENST00000579061 FAM237BA0A1B0GVD1 139 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 SDR42E2A6NKP2 422 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 BHMG1C9JSJ3 638 aaPredicted RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 KPNA5O15131 536 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 PFDN6O15212 129 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 KDM1AO60341 852 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 GPC4O75487 556 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 NDUFS3O75489 264 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 TMEM63AO94886 807 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 ZBTB11O95625 1053 aaPredicted RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 PAMP19021 973 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 POLR2CP19387 275 aaPredicted RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 ARNTP27540 789 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 CCR7P32248 378 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 KPNA2P52292 529 aaKnown RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 HSD11B2P80365 405 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 SRSF6Q13247 344 aaKnown RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 SYTL3Q4VX76 610 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 DNAJC21Q5F1R6 531 aaKnown RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 SDCCAG8Q86SQ7 713 aaPredicted RBP14.42□□□□□ -0.1
SS18-212ENST00000579061 PPP1R3BQ86XI6 285 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 SLC22A15Q8IZD6 547 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 D2HGDHQ8N465 521 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 ESX1Q8N693 406 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 ASZ1Q8WWH4 475 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 SLCO2A1Q92959 643 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 PANX3Q96QZ0 392 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 P2RY12Q9H244 342 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 SAMD15Q9P1V8 674 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 GNPTGQ9UJJ9 305 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 RARRES3Q9UL19 164 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 ASF1AQ9Y294 204 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
SS18-212ENST00000579061 USP27XA6NNY8 438 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 ZNF185O15231 689 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 AVILO75366 819 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 VAPBO95292 243 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 APOA4P06727 396 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 OGNP20774 298 aaKnown RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 MAGEA3P43357 314 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 ARCN1P48444 511 aaKnown RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 ARL4DP49703 201 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 GNG11P61952 73 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 BRD3Q15059 726 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 TYSND1Q2T9J0 566 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 TMTC4Q5T4D3 741 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 RNF187Q5TA31 235 aaPredicted RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 PAPD7Q5XG87 772 aaKnown RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 TIPARPQ7Z3E1 657 aaKnown RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 LDB1Q86U70 411 aaPredicted RBP14.41□□□□□ -0.1
SS18-212ENST00000579061 AMIGO1Q86WK6 493 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 RASGRP3Q8IV61 690 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 NAT8LQ8N9F0 302 aa14.41□□□□□ -0.1
SS18-212ENST00000579061 OR5AR1Q8NGP9 310 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms