RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 APOA4P06727 396 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 MTHFD1P11586 935 aaKnown RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 PSMA3P25788 255 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 NDUFS1P28331 727 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CCKBRP32239 447 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CSTF2P33240 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMG6-211ENST00000572369 PREPP48147 710 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 LSSP48449 732 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 LIMK2P53671 638 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 ITGA8P53708 1063 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 ARL4CP56559 192 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 UBE2IP63279 158 aaKnown RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 CALCOCO2Q13137 446 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 RPA4Q13156 261 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 EIF3IQ13347 325 aaKnown RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 GPR18Q14330 331 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SEMA3AQ14563 771 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 RTP5Q14D33 572 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 TMED2Q15363 201 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 LONRF1Q17RB8 773 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 ANKRD20A4Q4UJ75 823 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 RNF187Q5TA31 235 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 ARMC3Q5W041 872 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 KIAA0930Q6ICG6 404 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 ARMC6Q6NXE6 501 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 IRGCQ6NXR0 463 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 TMEM71Q6P5X7 295 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 KLHL35Q6PF15 583 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CLEC18BQ6UXF7 455 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 ATG14Q6ZNE5 492 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 FAM129CQ86XR2 697 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 PLXDC1Q8IUK5 500 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 PDIK1LQ8N165 341 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 LILRA3Q8N6C8 439 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 CLEC18CQ8NCF0 446 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 BBOF1Q8ND07 529 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 RCBTB1Q8NDN9 531 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SPATA4Q8NEY3 305 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SPDYE1Q8NFV5 336 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 OR4D9Q8NGE8 314 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CALML6Q8TD86 181 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SKA2Q8WVK7 121 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 JPH3Q8WXH2 748 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 TTC9Q92623 222 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 TMEM159Q96B96 161 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 STAMBPL1Q96FJ0 436 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SGSM3Q96HU1 749 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CCDC74BQ96LY2 380 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 PANX3Q96QZ0 392 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 INSM2Q96T92 566 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 CCDC68Q9H2F9 335 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 DPH5Q9H2P9 285 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 UCK1Q9HA47 277 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 SLC40A1Q9NP59 571 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 PPANQ9NQ55 473 aaKnown RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 THSD1Q9NS62 852 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 C20orf96Q9NUD7 363 aaPredicted RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 PISDQ9UG56 409 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 GNPTGQ9UJJ9 305 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 UTP11Q9Y3A2 253 aaKnown RBP7.6□□□□□ -1.19
SMG6-211ENST00000572369 LOXL2Q9Y4K0 774 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 PDZD2O15018 2839 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 CELSR1Q9NYQ6 3014 aa7.6□□□□□ -1.19
SMG6-211ENST00000572369 BLACEA4D250 179 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 FAM187AA6NFU0 413 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 PRR19A6NJB7 356 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 KIF2AO00139 706 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 KPNA5O15131 536 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 FANCGO15287 622 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 KDM1AO60341 852 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 BANF1O75531 89 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 USP1O94782 785 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 HGFP14210 728 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 PGAM1P18669 254 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CHRM3P20309 590 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 OGNP20774 298 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 TNFRSF8P28908 595 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 PDHA2P29803 388 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 FMO4P31512 558 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CSF2RBP32927 897 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 ARL4DP49703 201 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 MRPS25P82663 173 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 PLOD1Q02809 727 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 ZFP36L1Q07352 338 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 HSPA14Q0VDF9 509 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 NFATC3Q12968 1075 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 PRKAA1Q13131 559 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TRA2AQ13595 282 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMG6-211ENST00000572369 MORF4L2Q15014 288 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 HIF1AQ16665 826 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 KIF26BQ2KJY2 2108 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 HP1BP3Q5SSJ5 553 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 TMEM164Q5U3C3 297 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 ZNF470Q6ECI4 717 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 NEPROQ6NW34 567 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 DUS1LQ6P1R4 473 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 WDR74Q6RFH5 385 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 NAPRTQ6XQN6 538 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms