RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	UBE2V1	Q13404	147 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	CRYM	Q14894	314 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	SGSM1	Q2NKQ1	1148 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	ZSCAN23	Q3MJ62	389 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	FASTKD1	Q53R41	847 aa	Known RBP	2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	GKAP1	Q5VSY0	366 aa	Predicted RBP	2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	SNX30	Q5VWJ9	437 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	KLHL35	Q6PF15	583 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	DENND5B	Q6ZUT9	1274 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF554	Q86TJ5	538 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	KCNG4	Q8TDN1	519 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	HPSE2	Q8WWQ2	592 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	HSD17B8	Q92506	261 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	MAGED4	Q96JG8	741 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	SEMA6A	Q9H2E6	1030 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	PLK3	Q9H4B4	646 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	IRAK4	Q9NWZ3	460 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	ORC3	Q9UBD5	711 aa	Predicted RBP	2.87	□□□□□ -1.95
UBR1-209	ENST00000569243		A0A1W2PR77	199 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	MYO1G	B0I1T2	1018 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243		H3BQ06	376 aa	Predicted RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ACADS	P16219	412 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	UGT1A4	P22310	534 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	CBL	P22681	906 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	TM4SF1	P30408	202 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ARL3	P36405	182 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	MAGEA11	P43364	429 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	CDR2	Q01850	454 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	AIMP2	Q13155	320 aa	Known RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	GPR17	Q13304	367 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	MAMLD1	Q13495	774 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	TAF13	Q15543	124 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	GCNT6	Q5T4J0	391 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	CCDC70	Q6NSX1	233 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF774	Q6NX45	483 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243		Q6ZSR9	355 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	RSRC2	Q7L4I2	434 aa	Known RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	LRRTM1	Q86UE6	522 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	PDILT	Q8N807	584 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	PPFIBP2	Q8ND30	876 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	PRSS33	Q8NF86	280 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	DYRK2	Q92630	601 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	GTF3A	Q92664	365 aa	Known RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	SEMA4D	Q92854	862 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ZKSCAN4	Q969J2	545 aa	Predicted RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	PIGQ	Q9BRB3	760 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ITPA	Q9BY32	194 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	PELI2	Q9HAT8	420 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	OLA1	Q9NTK5	396 aa	Known RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	MIOS	Q9NXC5	875 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ERAP1	Q9NZ08	941 aa		2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	ASTN2	O75129	1339 aa	Predicted RBP	2.86	□□□□□ -1.95
UBR1-209	ENST00000569243	MED19	A0JLT2	244 aa	Predicted RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	PRKRA	O75569	313 aa	Known RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	ACADM	P11310	421 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	GABRB1	P18505	474 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	EFNA1	P20827	205 aa	Predicted RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	PPARG	P37231	505 aa	Predicted RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	HNF4A	P41235	474 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	PGF	P49763	221 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	HUNK	P57058	714 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	GSDMD	P57764	484 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	PRKCZ	Q05513	592 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	ELAVL2	Q12926	359 aa	Known RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	IK	Q13123	557 aa	Predicted RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	RAPSN	Q13702	412 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	C2CD6	Q53TS8	623 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	CYP4A22	Q5TCH4	519 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	TEX11	Q8IYF3	940 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	ABCA7	Q8IZY2	2146 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	CRYBG2	Q8N1P7	616 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	LINC00612	Q8N6U2	182 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF383	Q8NA42	475 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	TMEM178A	Q8NBL3	297 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	SCFD2	Q8WU76	684 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	SUSD6	Q92537	303 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	USP6NL	Q92738	828 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	NSMCE3	Q96MG7	304 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	CMTM3	Q96MX0	182 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	GPATCH1	Q9BRR8	931 aa	Known RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	HGH1	Q9BTY7	390 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	ACKR4	Q9NPB9	350 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	INTS9	Q9NV88	658 aa	Known RBP	2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	FBXL17	Q9UF56	701 aa		2.85	□□□□□ -1.95
UBR1-209	ENST00000569243	CCDC189	A1A4V9	331 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	ELOVL7	A1L3X0	281 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	MSGN1	A6NI15	193 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	PI15	O43692	258 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CREB3	O43889	395 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CDC123	O75794	336 aa	Predicted RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CD4	P01730	458 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	DNAH10OS	P0CZ25	163 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	PRLR	P16471	622 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	CDH8	P55286	799 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	HERV-K104	P61576	105 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	SET	Q01105	290 aa	Predicted RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	RRS1	Q15050	365 aa	Known RBP	2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	WLS	Q5T9L3	541 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	ADAL	Q6DHV7	355 aa		2.84	□□□□□ -1.95
UBR1-209	ENST00000569243	PAQR6	Q6TCH4	344 aa		2.84	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms