RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PRKAA1Q13131 559 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 KCNJ11Q14654 390 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 TRIP13Q15645 432 aaPredicted RBP19.73■□□□□ 0.75
CLK3-225ENST00000569063 ARMC3Q5W041 872 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 PPP1R3BQ86XI6 285 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 RASGRP3Q8IV61 690 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 SLC35F6Q8N357 371 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 D2HGDHQ8N465 521 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 ESX1Q8N693 406 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 OR52E1Q8NGJ3 308 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 FCRL4Q96PJ5 515 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 KIFC1Q9BW19 673 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 AP1M1Q9BXS5 423 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 MRM3Q9HC36 420 aaKnown RBP19.73■□□□□ 0.75
CLK3-225ENST00000569063 PDE7BQ9NP56 450 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 ANAPC5Q9UJX4 755 aa19.73■□□□□ 0.75
CLK3-225ENST00000569063 BHMG1C9JSJ3 638 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 PGRMC1O00264 195 aaKnown RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 CD3EAPO15446 510 aaKnown RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 SPAG6O75602 509 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 ZBTB11O95625 1053 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 KRT14P02533 472 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 POLR2CP19387 275 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 MGAT1P26572 445 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 NMBRP28336 390 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 COILP38432 576 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 TTPAP49638 278 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 ARL4DP49703 201 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 SARNPP82979 210 aaKnown RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 ACY1Q03154 408 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 GPS1Q13098 491 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 TUBB3Q13509 450 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 KCNAB1Q14722 419 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 KCTD19Q17RG1 926 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 AMIGO1Q86WK6 493 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 ACTRT1Q8TDG2 376 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 COG1Q8WTW3 980 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 KIAA1143Q96AT1 154 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 ELMO2Q96JJ3 720 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 OSBPL9Q96SU4 736 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 EFHD1Q9BUP0 239 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 CARD6Q9BX69 1037 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 TSSK1BQ9BXA7 367 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 GPN2Q9H9Y4 310 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 SYBUQ9NX95 663 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 MARCH4Q9P2E8 410 aaPredicted RBP19.72■□□□□ 0.75
CLK3-225ENST00000569063 POMT2Q9UKY4 750 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 NEU2Q9Y3R4 380 aa19.72■□□□□ 0.75
CLK3-225ENST00000569063 LOC101059948A0A1B0GTJ6 334 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 BTN3A3O00478 584 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 CES2O00748 559 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 KIAA0754O94854 1291 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 CCR7P32248 378 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 STAT5AP42229 794 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 ARCN1P48444 511 aaKnown RBP19.71■□□□□ 0.75
CLK3-225ENST00000569063 CYP4F2P78329 520 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 C19orf57Q0VDD7 668 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 PRKG2Q13237 762 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 BRD3Q15059 726 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 LINC00303Q3SY05 128 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 SYTL3Q4VX76 610 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 CCDC137Q6PK04 289 aaKnown RBP19.71■□□□□ 0.75
CLK3-225ENST00000569063 C6orf15Q6UXA7 325 aaPredicted RBP19.71■□□□□ 0.75
CLK3-225ENST00000569063 NAPRTQ6XQN6 538 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 TBC1D21Q8IYX1 336 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 MPP5Q8N3R9 675 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 SLC45A3Q96JT2 553 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 HGH1Q9BTY7 390 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 C1GALT1Q9NS00 363 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 POLG2Q9UHN1 485 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 RARRES3Q9UL19 164 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 SOX13Q9UN79 622 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 BTRCQ9Y297 605 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 PIKFYVEQ9Y2I7 2098 aa19.71■□□□□ 0.75
CLK3-225ENST00000569063 BTN3A1O00481 513 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 PRMT5O14744 637 aaPredicted RBP19.7■□□□□ 0.74
CLK3-225ENST00000569063 KIF5CO60282 957 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 EBLN1P0CF75 366 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 PRDX3P30048 256 aaKnown RBP19.7■□□□□ 0.74
CLK3-225ENST00000569063 VPS41P49754 854 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 TUBB4BP68371 445 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 TUBB2AQ13885 445 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 COL9A2Q14055 689 aaPredicted RBP19.7■□□□□ 0.74
CLK3-225ENST00000569063 LY6DQ14210 128 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 LDB1Q86U70 411 aaPredicted RBP19.7■□□□□ 0.74
CLK3-225ENST00000569063 UNC5BQ8IZJ1 945 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 OR5AR1Q8NGP9 310 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 MFSD3Q96ES6 412 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 PPM1MQ96MI6 270 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 NRTNQ99748 197 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 TUBB2BQ9BVA1 445 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 FGF21Q9NSA1 209 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 TRMT1Q9NXH9 659 aaKnown RBP19.7■□□□□ 0.74
CLK3-225ENST00000569063 SNX12Q9UMY4 172 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 ASF1AQ9Y294 204 aa19.7■□□□□ 0.74
CLK3-225ENST00000569063 GSAPA4D1B5 854 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 ZNF891A8MT65 544 aaPredicted RBP19.69■□□□□ 0.74
CLK3-225ENST00000569063 AVILO75366 819 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 GPC4O75487 556 aa19.69■□□□□ 0.74
CLK3-225ENST00000569063 CDH3P22223 829 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms