RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CCNYL3P0C7X3 344 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A6P19224 532 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A1P22309 533 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A4P22310 534 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 CD97P48960 835 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 NPY2RP49146 381 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 ITGA8P53708 1063 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 TMPRSS15P98073 1019 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 ITGA9Q13797 1035 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 PCID2Q5JVF3 399 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 ARMC3Q5W041 872 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 MICALCLQ6ZW33 695 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 NLRP9Q7RTR0 991 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 LRRTM4Q86VH4 590 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 AGGF1Q8N302 714 aaeCLIP16.26■□□□□ 0.19
NEK9-211ENST00000557673 MMGT1Q8N4V1 131 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 NOA1Q8NC60 698 aaKnown RBP16.26■□□□□ 0.19
NEK9-211ENST00000557673 MIB2Q96AX9 1013 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 STAMBPL1Q96FJ0 436 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 C9orf72Q96LT7 481 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 ZNF778Q96MU6 729 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 PSMG3-AS1Q96PY0 264 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 TBC1D10AQ9BXI6 508 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A7Q9HAW7 530 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A10Q9HAW8 530 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 UGT1A8Q9HAW9 530 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 MRM3Q9HC36 420 aaKnown RBP16.26■□□□□ 0.19
NEK9-211ENST00000557673 SIDT1Q9NXL6 827 aaKnown RBP16.26■□□□□ 0.19
NEK9-211ENST00000557673 SLC2A6Q9UGQ3 507 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 TP53TG5Q9Y2B4 290 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 DNAJC16Q9Y2G8 782 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 PIKFYVEQ9Y2I7 2098 aa16.26■□□□□ 0.19
NEK9-211ENST00000557673 SMAPO00193 183 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 NDC80O14777 642 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 KMOO15229 486 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 UBXN7O94888 489 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 RECKO95980 971 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 VIPP01282 170 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 C9P02748 559 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
NEK9-211ENST00000557673 AMD1P17707 334 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 XRCC1P18887 633 aaPredicted RBP16.25■□□□□ 0.19
NEK9-211ENST00000557673 ITGALP20701 1170 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 MC4RP32245 332 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 TMEM115Q12893 351 aaPredicted RBP16.25■□□□□ 0.19
NEK9-211ENST00000557673 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
NEK9-211ENST00000557673 ATP1A1-AS1Q5TC04 95 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 DUPD1Q68J44 220 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 TRAPPC5Q8IUR0 188 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 RASGRP3Q8IV61 690 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 MPP5Q8N3R9 675 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 CEP112Q8N8E3 955 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 DDHD1Q8NEL9 900 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 KIFC1Q9BW19 673 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 DPH5Q9H2P9 285 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 L2HGDHQ9H9P8 463 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 LRRC4CQ9HCJ2 640 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 TREX1Q9NSU2 369 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 GRHL1Q9NZI5 618 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 SCHIP1Q9P0W5 487 aaPredicted RBP16.25■□□□□ 0.19
NEK9-211ENST00000557673 SOX13Q9UN79 622 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 SNX24Q9Y343 169 aa16.25■□□□□ 0.19
NEK9-211ENST00000557673 AGAP14A8MT82 685 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 RFPL1O75677 317 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 MT-ND3P03897 115 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 UBE2IP63279 158 aaKnown RBP16.24■□□□□ 0.19
NEK9-211ENST00000557673 GTF2H3Q13889 308 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 ERV3-1Q14264 604 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 C4orf17Q53FE4 359 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 GPRC6AQ5T6X5 926 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 AFTPHQ6ULP2 937 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 TMEM26Q6ZUK4 368 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 ASB18Q6ZVZ8 466 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 RASGEF1AQ8N9B8 481 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 BBOF1Q8ND07 529 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 ZDHHC12Q96GR4 267 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 CDKN2AIPNLQ96HQ2 116 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 TIMM29Q9BSF4 260 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 CARD6Q9BX69 1037 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 ZNF768Q9H5H4 540 aaKnown RBP16.24■□□□□ 0.19
NEK9-211ENST00000557673 CHRAC1Q9NRG0 131 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 WHRNQ9P202 907 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 CROTQ9UKG9 612 aa16.24■□□□□ 0.19
NEK9-211ENST00000557673 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
NEK9-211ENST00000557673 MRPS18BQ9Y676 258 aaKnown RBP16.24■□□□□ 0.19
NEK9-211ENST00000557673 TRBV5-4A0A0C4DH59 114 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 CCDC162PA2VCL2 907 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 PDZK1P1A8MUH7 402 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 KATNA1O75449 491 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 RASSF9O75901 435 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 F8A1P23610 371 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 NMBRP28336 390 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 FOXN2P32314 431 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 CTSCP53634 463 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 GFERP55789 205 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 HIF1AQ16665 826 aa16.23■□□□□ 0.19
NEK9-211ENST00000557673 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
NEK9-211ENST00000557673 SNX20Q7Z614 316 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms