RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CRYZL1O95825 349 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ALDH1A1P00352 501 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 F11P03951 625 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 BMP1P13497 986 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 GPX3P22352 226 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ATP5C1P36542 298 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ECT2LQ008S8 904 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 CHRNEQ04844 493 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PAGE2BQ5JRK9 111 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 CCDC81Q6ZN84 652 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 RETREG3Q86VR2 466 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 LACC1Q8IV20 430 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PIANPQ8IYJ0 282 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 MFSD4AQ8N468 514 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 ANGPTL6Q8NI99 470 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PEX13Q92968 403 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 MUL1Q969V5 352 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 C19orf60Q96EN9 201 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 MAGEH1Q9H213 219 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 AKTIPQ9H8T0 292 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 UBA2Q9UBT2 640 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-207ENST00000553837 PCDHGC4Q9Y5F7 938 aa12.05□□□□□ -0.48
SHMT2-207ENST00000553837 SCN5AQ14524 2016 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 UBA6A0AVT1 1052 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 SYCE1LA8MT33 242 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 ANGPT2O15123 496 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 ASNA1O43681 348 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 KDELR3O43731 214 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CD160O95971 181 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 INHAP05111 366 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CCDC159P0C7I6 412 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 HMGA1P17096 107 aaKnown RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 M6PRP20645 277 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 HTR1BP28222 390 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 OR1D2P34982 312 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CDH4P55283 916 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 GABARAPL2P60520 117 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 YBX1P67809 324 aaKnown RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 FOXM1Q08050 763 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 GRB7Q14451 532 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CTF1Q16619 201 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 RFPL4BQ6ZWI9 263 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 USP43Q70EL4 1123 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 C16orf59Q7L2K0 433 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 SNX29P2Q8IUI4 249 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 PHYKPLQ8IUZ5 450 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 C8orf59Q8N0T1 100 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 OR7A2PQ8NGA2 310 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 LRCH3Q96II8 777 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 EGLN2Q96KS0 407 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 TRMOQ9BU70 441 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 TP63Q9H3D4 680 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-207ENST00000553837 MID1IP1Q9NPA3 183 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 COMMD8Q9NX08 183 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 CMTM6Q9NX76 183 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 SNX5Q9Y5X3 404 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 ANKRD36A6QL64 1941 aa12.04□□□□□ -0.48
SHMT2-207ENST00000553837 A0A0J9YYE9 177 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 A0A1W2PQ67 120 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 ISPDA4D126 451 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 A8MU76 341 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 C9JVG2 144 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 H0Y858 1186 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 CDC7O00311 574 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 TOR1BO14657 336 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 INSIG1O15503 277 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 GPR39O43194 453 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 OR1I1O60431 355 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 GUCY1B2O75343 617 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 STC2O76061 302 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 GSNP06396 782 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 ABCB1P08183 1280 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-207ENST00000553837 ITIH1P19827 911 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 SHMT2P34897 504 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-207ENST00000553837 ZIK1Q3SY52 487 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-207ENST00000553837 SLX4IPQ5VYV7 408 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 LINGO4Q6UY18 593 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 ANKS3Q6ZW76 656 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 NPAS4Q8IUM7 802 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 OR6Q1Q8NGQ2 317 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 RMDN1Q96DB5 314 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 SCLYQ96I15 445 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 C12orf10Q9HB07 376 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 TLR9Q9NR96 1032 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 LRFN2Q9ULH4 789 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 RIMKLBQ9ULI2 386 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 PCDHGA11Q9Y5H2 935 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 TCRBV5S2A0A599 114 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 C2orf78A6NCI8 922 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 H7C4K7 107 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 CBX4O00257 560 aa12.03□□□□□ -0.48
SHMT2-207ENST00000553837 NR5A2O00482 541 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms