RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 LRRC8CQ8TDW0 803 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 EXT2Q93063 718 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 PTERQ96BW5 349 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 HIST1H2AHQ96KK5 128 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 HIST1H2AJQ99878 128 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 H2AFJQ9BTM1 129 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 CAPS2Q9BXY5 557 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 GSDMCQ9BYG8 508 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 TRNAU1APQ9NX07 287 aaKnown RBP11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 COPG2Q9UBF2 871 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 CDYLQ9Y232 598 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 OARD1Q9Y530 152 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 PCDHGA2Q9Y5H1 932 aa11.55□□□□□ -0.56
TM9SF1-207ENST00000528895 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 EML5Q05BV3 1969 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 CACNA1IQ9P0X4 2223 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PDZK1P1A8MUH7 402 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 TLR4O00206 839 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 CDC7O00311 574 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 VILLO15195 856 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 BPGMP07738 259 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 SP9P0CG40 484 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 CTSEP14091 401 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 GFAPP14136 432 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 IDSP22304 550 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 ATP5F1P24539 256 aaPredicted RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 HALP42357 657 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 CLCNKAP51800 687 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 HK3P52790 923 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 NXPH1P58417 271 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 NFKB2Q00653 900 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 GUCY1A3Q02108 690 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 FZD2Q14332 565 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PCLAFQ15004 111 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 OR4D1Q15615 310 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PDK4Q16654 411 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PLK5Q496M5 336 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 TPRG1LQ5T0D9 272 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 METRNLQ641Q3 311 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 TTC23LQ6PF05 361 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 UNC5DQ6UXZ4 953 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 NUDCD3Q8IVD9 361 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PHACTR4Q8IZ21 702 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 MAGEC3Q8TD91 643 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 NELL1Q92832 810 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 TSACCQ96A04 125 aaPredicted RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 ATOH8Q96SQ7 321 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 C12orf65Q9H3J6 166 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 APOBEC3BQ9UH17 382 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 KCNK6Q9Y257 313 aa11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 PCYT1BQ9Y5K3 369 aaPredicted RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 ATXN2Q99700 1313 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-207ENST00000528895 WDR91A4D1P6 747 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 UBXN8O00124 270 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 KDM1AO60341 852 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 MATN4O95460 622 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 SLC2A4P14672 509 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ITPKAP23677 461 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ALDH3A1P30838 453 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 HOXD12P35452 270 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ACTR1BP42025 376 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 AP1S2P56377 157 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ACTR1AP61163 376 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 NAA20P61599 178 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 GNGT1P63211 74 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 CDKL1Q00532 357 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 SIM2Q14190 667 aaPredicted RBP11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 PPP1R3AQ16821 1122 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 LIPMQ5VYY2 423 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ZC3H14Q6PJT7 736 aaKnown RBP11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 SBSNQ6UWP8 590 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 CYHR1Q6ZMK1 362 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 FAM83HQ6ZRV2 1179 aaPredicted RBP11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 C10orf107Q8IVU9 208 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 TCAIMQ8N3R3 496 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 FBXO39Q8N4B4 442 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 LILRA3Q8N6C8 439 aaPredicted RBP11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 PDPRQ8NCN5 879 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 CKAP2Q8WWK9 683 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 ZC3H10Q96K80 434 aaKnown RBP11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 MAGEB18Q96M61 343 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 EGFL8Q99944 293 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 SLC12A9Q9BXP2 914 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 OR52A5Q9H2C5 316 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 RDH14Q9HBH5 336 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 PARVBQ9HBI1 364 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 TM7SF3Q9NS93 570 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 DNAJC28Q9NX36 388 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 CD274Q9NZQ7 290 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 SLC23A2Q9UGH3 650 aa11.53□□□□□ -0.56
TM9SF1-207ENST00000528895 FANCMQ8IYD8 2048 aa11.52□□□□□ -0.56
TM9SF1-207ENST00000528895 A8MT66 165 aa11.52□□□□□ -0.57
TM9SF1-207ENST00000528895 TARM1B6A8C7 271 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms