RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ATXN7O15265 892 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 RAD1O60671 282 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 FGF5P12034 268 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 RPS3P23396 243 aaKnown RBP eCLIP11.78□□□□□ -0.522e-8■■■■■ 45.7
TRAPPC4-209ENST00000528230 PREPP48147 710 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 PPP1CAP62136 330 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 ACY1Q03154 408 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 FOXM1Q08050 763 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 PRKAA1Q13131 559 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 PAPD7Q5XG87 772 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 MRNIPQ6NTE8 343 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 SDCCAG8Q86SQ7 713 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 CAND1Q86VP6 1230 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 TBC1D21Q8IYX1 336 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 CACNA2D3Q8IZS8 1091 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 NLGN4XQ8N0W4 816 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 PHC3Q8NDX5 983 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 NLGN4YQ8NFZ3 816 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 ASZ1Q8WWH4 475 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 SLCO2A1Q92959 643 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 MFSD3Q96ES6 412 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 TCF12Q99081 682 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 MAP3K3Q99759 626 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 SRMSQ9H3Y6 488 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
TRAPPC4-209ENST00000528230 FAM237BA0A1B0GVD1 139 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 KPNA5O15131 536 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 KDM1AO60341 852 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 GPC4O75487 556 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 NDUFS3O75489 264 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 STK17BO94768 372 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 VAPBO95292 243 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 ZBTB11O95625 1053 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 DLGAP3O95886 979 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 PAMP19021 973 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 POLR2CP19387 275 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 ARNTP27540 789 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 CCR7P32248 378 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 GNG11P61952 73 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 SH3BP2P78314 561 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 HSD11B2P80365 405 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 ABHD18Q0P651 414 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 DNAJC21Q5F1R6 531 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 LDB1Q86U70 411 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 AMIGO1Q86WK6 493 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 PPIL6Q8IXY8 311 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC22A15Q8IZD6 547 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 D2HGDHQ8N465 521 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 IL22RA1Q8N6P7 574 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 NAT8LQ8N9F0 302 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 SIDT2Q8NBJ9 832 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR5K2Q8NHB8 316 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 PANX3Q96QZ0 392 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 P2RY12Q9H244 342 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 PDE7BQ9NP56 450 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 C1GALT1Q9NS00 363 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 WDR70Q9NW82 654 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 MARCH4Q9P2E8 410 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 GNPTGQ9UJJ9 305 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 POMT2Q9UKY4 750 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 ASF1AQ9Y294 204 aa11.77□□□□□ -0.53
TRAPPC4-209ENST00000528230 AVILO75366 819 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TMEM63AO94886 807 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLCO2B1O94956 709 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 APOA4P06727 396 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 OGNP20774 298 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 AOAHP28039 575 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 SHMT2P34897 504 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 MAGEA3P43357 314 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 ARL4DP49703 201 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 KPNA2P52292 529 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 ADARP55265 1226 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 BRD3Q15059 726 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TYSND1Q2T9J0 566 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TMTC4Q5T4D3 741 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 RNF187Q5TA31 235 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 PTRHD1Q6GMV3 140 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 CES3Q6UWW8 571 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TIPARPQ7Z3E1 657 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCGF5Q86SE9 256 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 VASH2Q86V25 355 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 PPP1R3BQ86XI6 285 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 ESX1Q8N693 406 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 OR8K5Q8NH50 307 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 TTC9Q92623 222 aa11.76□□□□□ -0.53
TRAPPC4-209ENST00000528230 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms