RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MTHFD2	P13995	350 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CD1D	P15813	335 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	UGT1A6	P19224	532 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	FAS	P25445	335 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	RPL10	P27635	214 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	OXTR	P30559	389 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	MAPK8	P45983	427 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	KCNC1	P48547	511 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	LHX1	P48742	406 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	MLLT6	P55198	1093 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CDKN2D	P55273	166 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	WNT3A	P56704	352 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	EEFSEC	P57772	596 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	STX1B	P61266	288 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ESRRG	P62508	458 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	HERVK_113	P63132	956 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PHEX	P78562	749 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SMARCB1	Q12824	385 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	GRIK2	Q13002	908 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	MTAP	Q13126	283 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PMS2P3	Q13401	168 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	FZD5	Q13467	585 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	RAB39A	Q14964	217 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TAF12	Q16514	161 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ARHGAP15	Q53QZ3	475 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CYBRD1	Q53TN4	286 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PITRM1	Q5JRX3	1037 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF787	Q6DD87	383 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CLEC6A	Q6EIG7	209 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TTC33	Q6PID6	262 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	GAREM2	Q75VX8	874 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ISCA2	Q86U28	154 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TMC8	Q8IU68	726 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CILP2	Q8IUL8	1156 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	LRRC49	Q8IUZ0	686 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	KIAA2013	Q8IYS2	634 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF683	Q8IZ20	524 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	CLYBL	Q8N0X4	340 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TTC9B	Q8N6N2	239 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SNX31	Q8N9S9	440 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	OR13F1	Q8NGS4	319 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	GPR150	Q8NGU9	434 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	OR10T2	Q8NGX3	314 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PNPT1	Q8TCS8	783 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	BPIFB1	Q8TDL5	484 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SH3RF2	Q8TEC5	729 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	FAM3C	Q92520	227 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PSMG2	Q969U7	264 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF837	Q96EG3	531 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	IMP4	Q96G21	291 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SMARCD1	Q96GM5	515 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PCED1B	Q96HM7	432 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ATOH8	Q96SQ7	321 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SEPT5	Q99719	369 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SLC39A3	Q9BRY0	314 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	ERVK-6	Q9BXR3	956 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TDRD1	Q9BXT4	1180 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TRIM54	Q9BYV2	358 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	SLC25A51	Q9H1U9	297 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TUBB1	Q9H4B7	451 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	NOL6	Q9H6R4	1146 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	WDCP	Q9H6R7	721 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	LMAN1L	Q9HAT1	526 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	AIG1	Q9NVV5	245 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	TMEM45A	Q9NWC5	275 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	RIMKLB	Q9ULI2	386 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PCDHGA2	Q9Y5H1	932 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	GPR45	Q9Y5Y3	372 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	PIAS3	Q9Y6X2	628 aa		7.71	□□□□□ -1.18
SPIDR-223	ENST00000524033	MYBPHL	A2RUH7	354 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	SHISA7	A6NL88	538 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033		H0YAE9	185 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	UPK1A	O00322	258 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	NR5A2	O00482	541 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	EI24	O14681	340 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	PIP5K1B	O14986	540 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	SNAP91	O60641	907 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	CBFA2T3	O75081	653 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	COQ9	O75208	318 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	EED	O75530	441 aa	Known RBP	7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	STAMBP	O95630	424 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	RPS17	P08708	135 aa	Known RBP	7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	IDO1	P14902	403 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	ZNF12	P17014	697 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	LBP	P18428	481 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	CD247	P20963	164 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	PSMA3	P25788	255 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	GABRR2	P28476	465 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	HTR1E	P28566	365 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	ID4	P47928	161 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	GSK3B	P49841	420 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	KPNA1	P52294	538 aa	Predicted RBP	7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	PLK1	P53350	603 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	SLC12A2	P55011	1212 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	YBX1	P67809	324 aa	Known RBP	7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	FCHO2	Q0JRZ9	810 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	TMED1	Q13445	227 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	SEPT6	Q14141	434 aa		7.7	□□□□□ -1.18
SPIDR-223	ENST00000524033	GRB7	Q14451	532 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 105 ms