RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	VPS41	P49754	854 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	ABHD18	Q0P651	414 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	TMED2	Q15363	201 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	TRIP13	Q15645	432 aa	Predicted RBP	23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	XKR5	Q6UX68	686 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	ZNF534	Q76KX8	674 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	OTUD6B	Q8N6M0	293 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	OR4E2	Q8NGC2	313 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	GSDMB	Q8TAX9	411 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	ASZ1	Q8WWH4	475 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	MS4A14	Q96JA4	679 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	FCRL4	Q96PJ5	515 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	PANX3	Q96QZ0	392 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	KIFC1	Q9BW19	673 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	FANCE	Q9HB96	536 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	XAB2	Q9HCS7	855 aa	Known RBP	23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	APMAP	Q9HDC9	416 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	TREX1	Q9NSU2	369 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	TRMT1	Q9NXH9	659 aa	Known RBP	23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	GNPTG	Q9UJJ9	305 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	RARRES3	Q9UL19	164 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	SNX12	Q9UMY4	172 aa		23.53	■■□□□ 1.36
CNOT7-204	ENST00000518885	PRMT5	O14744	637 aa	Predicted RBP	23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	KPNA5	O15131	536 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	PHF2	O75151	1096 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	NDUFS3	O75489	264 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	APOA4	P06727	396 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	FGF5	P12034	268 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	MLN	P12872	115 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	TCP1	P17987	556 aa	Known RBP	23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	MGAT1	P26572	445 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	PDHA2	P29803	388 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	TUBB3	Q13509	450 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	RNF187	Q5TA31	235 aa	Predicted RBP	23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	HOOK3	Q86VS8	718 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	AMIGO1	Q86WK6	493 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	OR8K5	Q8NH50	307 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	MAP3K3	Q99759	626 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	CARD6	Q9BX69	1037 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	GPN2	Q9H9Y4	310 aa	Predicted RBP	23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	ASF1A	Q9Y294	204 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	PRSS21	Q9Y6M0	314 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	CACNA1G	O43497	2377 aa		23.52	■■□□□ 1.36
CNOT7-204	ENST00000518885	AHCTF1	Q8WYP5	2266 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	IGHV5-51	A0A0C4DH38	117 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	GSAP	A4D1B5	854 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	OR1I1	O60431	355 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	CCNYL3	P0C7X3	344 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SHMT2	P34897	504 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SH3BP2	P78314	561 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	CRADD	P78560	199 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	KCNJ11	Q14654	390 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	PTRHD1	Q6GMV3	140 aa	Known RBP	23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	TTC27	Q6P3X3	843 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	CASC4	Q6P4E1	433 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	TBC1D21	Q8IYX1	336 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	STAMBPL1	Q96FJ0	436 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	HGH1	Q9BTY7	390 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	KCNF1	Q9H3M0	494 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	C1GALT1	Q9NS00	363 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SOHLH2	Q9NX45	425 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SYBU	Q9NX95	663 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	POMT2	Q9UKY4	750 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SOX13	Q9UN79	622 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	VPS9D1	Q9Y2B5	631 aa		23.51	■■□□□ 1.35
CNOT7-204	ENST00000518885	SLC5A10	A0PJK1	596 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	C2orf74	A8MZ97	194 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	POLR2C	P19387	275 aa	Predicted RBP	23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	CDH3	P22223	829 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	MC1R	Q01726	317 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	BRD3	Q15059	726 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	DNAJC21	Q5F1R6	531 aa	Known RBP	23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	C6orf15	Q6UXA7	325 aa	Predicted RBP	23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	PHC3	Q8NDX5	983 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	MCU	Q8NE86	351 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	OR52E1	Q8NGJ3	308 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	BBC3	Q96PG8	261 aa	Predicted RBP	23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	TCF12	Q99081	682 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	ARHGAP9	Q9BRR9	750 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	SPRY4	Q9C004	299 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	SYTL2	Q9HCH5	934 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	MRFAP1	Q9Y605	127 aa		23.5	■■□□□ 1.35
CNOT7-204	ENST00000518885	ZNF891	A8MT65	544 aa	Predicted RBP	23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	VAPB	O95292	243 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	DLGAP3	O95886	979 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	LIF	P15018	202 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	PPP1CA	P62136	330 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	TUBB4B	P68371	445 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	TUBB2A	Q13885	445 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	PPP1R7	Q15435	360 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	KIAA1614	Q5VZ46	1190 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	D2HGDH	Q8N465	521 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	OR5K2	Q8NHB8	316 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	COG1	Q8WTW3	980 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	TUBB2B	Q9BVA1	445 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	FGF21	Q9NSA1	209 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	LNPEP	Q9UIQ6	1025 aa		23.49	■■□□□ 1.35
CNOT7-204	ENST00000518885	SDR42E2	A6NKP2	422 aa		23.48	■■□□□ 1.35
CNOT7-204	ENST00000518885		H3BMM5	538 aa		23.48	■■□□□ 1.35

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms