RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CRLS1Q9UJA2 301 aa5.73□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CNOT6Q9ULM6 557 aaKnown RBP5.73□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TCAF1Q9Y4C2 921 aa5.73□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MAD1L1Q9Y6D9 718 aa5.73□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OTOGLQ3ZCN5 2332 aa5.73□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RALGAPA1Q6GYQ0 2036 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FAM186AA6NE01 2351 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PLXND1Q9Y4D7 1925 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CCDC162PA2VCL2 907 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NEMP2A6NFY4 417 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR51F1A6NGY5 319 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 AKAP10O43572 662 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PIAS2O75928 621 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CDK14O94921 469 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SEC31AO94979 1220 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CEACAM5P06731 702 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZNF8P17098 575 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PAMP19021 973 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MSH3P20585 1137 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ITGALP20701 1170 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 COL8A1P27658 744 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 AKT1P31749 480 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ADMP35318 185 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ELK3P41970 407 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZNF140P52738 457 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 HK3P52790 923 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ARL4CP56559 192 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KIAA1024LP59773 190 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DCDC1P59894 354 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 HNRNPKP61978 463 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PRAMEP78395 509 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 XIAPP98170 497 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GUCY2DQ02846 1103 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TMEM115Q12893 351 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GTF2H3Q13889 308 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SHBQ15464 509 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TESK1Q15569 626 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TRADDQ15628 312 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SMAD1Q15797 465 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RSPO4Q2I0M5 234 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ALG11Q2TAA5 492 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 GLE1Q53GS7 698 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FASTKD1Q53R41 847 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DNAJC21Q5F1R6 531 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DUPD1Q68J44 220 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 HIBCHQ6NVY1 386 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TMEM220Q6QAJ8 160 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CHST15Q7LFX5 561 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SNX20Q7Z614 316 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TAF8Q7Z7C8 310 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ADGRG6Q86SQ4 1221 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CCDC103Q8IW40 242 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RBFAQ8N0V3 343 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 MPP5Q8N3R9 675 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SLC25A45Q8N413 288 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OTUD6BQ8N6M0 293 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NOA1Q8NC60 698 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR4L1Q8NH43 312 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DTX3LQ8TDB6 740 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 LMX1AQ8TE12 382 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 IFT81Q8WYA0 676 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OR1E3Q8WZA6 343 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DIO2Q92813 273 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 STAMBPL1Q96FJ0 436 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 DCUN1D1Q96GG9 259 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 COX14Q96I36 57 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SIGLEC10Q96LC7 697 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ZNF778Q96MU6 729 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 KIFC1Q9BW19 673 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FRMD8Q9BZ67 464 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 EPB41L5Q9HCM4 733 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FGF22Q9HCT0 170 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 ATXN10Q9UBB4 475 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 NFKBIL1Q9UBC1 381 aaPredicted RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 APOBEC3BQ9UH17 382 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 TMPRSS11EQ9UL52 423 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SUFUQ9UMX1 484 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 APOBEC2Q9Y235 224 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 SLC17A4Q9Y2C5 497 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 PLEKHM1Q9Y4G2 1056 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 OAS3Q9Y6K5 1087 aaKnown RBP5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 RPS6KL1Q9Y6S9 549 aa5.72□□□□□ -1.49
SCARNA6.1-201ENST00000516989 CABIN1Q9Y6J0 2220 aa5.71□□□□□ -1.49
SCARNA6.1-201ENST00000516989 FAM237BA0A1B0GVD1 139 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 PRSS38A1L453 326 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GOLGA8KD6RF30 607 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GOLGA8TH3BQL2 631 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 H7C0S8 307 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GAPDHSO14556 408 aaPredicted RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 YY2O15391 372 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 CD3EAPO15446 510 aaKnown RBP5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 YKT6O15498 198 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 FFAR2O15552 330 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 AQP9O43315 295 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 GRID2O43424 1007 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 SH3BP5O60239 455 aa5.71□□□□□ -1.5
SCARNA6.1-201ENST00000516989 NUAK1O60285 661 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms