RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 KRT222Q8N1A0 295 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 OR52E1Q8NGJ3 308 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 CHD6Q8TD26 2715 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 LKAAEAR1Q8TD35 194 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 ELMO2Q96JJ3 720 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 SERPINB12Q96P63 405 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 OR6C1Q96RD1 312 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 MAP3K3Q99759 626 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 ASF1AQ9Y294 204 aa13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCHCR1-222ENST00000507459 SDK2Q58EX2 2172 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 GSAPA4D1B5 854 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 MLNP12872 115 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 PAMP19021 973 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 CCR7P32248 378 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 ARL4DP49703 201 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 VAC14Q08AM6 782 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 DHX34Q14147 1143 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 MRNIPQ6NTE8 343 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 FBXO38Q6PIJ6 1188 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 DTX1Q86Y01 620 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 C17orf53Q8N3J3 647 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 IL22RA1Q8N6P7 574 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 KLHL6Q8WZ60 621 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 ZNF669Q96BR6 464 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 TEFMQ96QE5 360 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 XKR8Q9H6D3 395 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 SIDT1Q9NXL6 827 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 TDRKHQ9Y2W6 561 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 MAD1L1Q9Y6D9 718 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
CCHCR1-222ENST00000507459 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 MAGEB16A2A368 324 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 BHMG1C9JSJ3 638 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 EFSO43281 561 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 RAD1O60671 282 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 NELFEP18615 380 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 ACADLP28330 430 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 FMO4P31512 558 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 PAFAH1B1P43034 410 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 PTGIRP43119 386 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 ATP1A2P50993 1020 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 ANKRD20A4Q4UJ75 823 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 KIAA0930Q6ICG6 404 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 VRK3Q8IV63 474 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 CFAP61Q8NHU2 1237 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 ASZ1Q8WWH4 475 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 UBXN4Q92575 508 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 NKD1Q969G9 470 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 PPM1MQ96MI6 270 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 ZPBPQ9BS86 351 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 TFB2MQ9H5Q4 396 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 PCYOX1Q9UHG3 505 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 CRYL1Q9Y2S2 319 aa13.75□□□□□ -0.21
CCHCR1-222ENST00000507459 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 TLCD2A6NGC4 264 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 BTN3A3O00478 584 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 BTN3A1O00481 513 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 DNALI1O14645 258 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 PFDN6O15212 129 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 FANCGO15287 622 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 APOA4P06727 396 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 F7P08709 466 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 CDH3P22223 829 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 KPNA2P52292 529 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 ABRQ12979 859 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 THOC5Q13769 683 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 PTK6Q13882 451 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 TMED2Q15363 201 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 RNASEH2BQ5TBB1 312 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 IZUMO3Q5VZ72 239 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 AMIGO1Q86WK6 493 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 TBC1D21Q8IYX1 336 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 CACNA2D3Q8IZS8 1091 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 FAM136AQ96C01 138 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 PANX3Q96QZ0 392 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 CD180Q99467 661 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 PILRAQ9UKJ1 303 aa13.74□□□□□ -0.21
CCHCR1-222ENST00000507459 PLAGL1Q9UM63 463 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms