RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TCP1P17987 556 aaKnown RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 NMBRP28336 390 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 FNTAP49354 379 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 TERF1P54274 439 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 HSD11B2P80365 405 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 TUBB3Q13509 450 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 MAP7Q14244 749 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 BRD3Q15059 726 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 KCTD19Q17RG1 926 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 TAF1BQ53T94 588 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 SIDT2Q8NBJ9 832 aaKnown RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 PHC3Q8NDX5 983 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 OR52E1Q8NGJ3 308 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 CPT1BQ92523 772 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 KIAA1143Q96AT1 154 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 WBP1Q96G27 269 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 MAP3K3Q99759 626 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 HGH1Q9BTY7 390 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 XAB2Q9HCS7 855 aaKnown RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 PDE7BQ9NP56 450 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 MARCH4Q9P2E8 410 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-213ENST00000482192 SOX13Q9UN79 622 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 ASF1AQ9Y294 204 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 NEU2Q9Y3R4 380 aa11.56□□□□□ -0.56
HMGN1-213ENST00000482192 GSAPA4D1B5 854 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 PRMT5O14744 637 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ZNF185O15231 689 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 AVILO75366 819 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 NDUFS3O75489 264 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 TMEM63AO94886 807 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 VAPBO95292 243 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 DLGAP3O95886 979 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 APOA4P06727 396 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 LIFP15018 202 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 PAMP19021 973 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 POLR2CP19387 275 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ACADLP28330 430 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 CCR7P32248 378 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 SHMT2P34897 504 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ARCN1P48444 511 aaKnown RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 KPNA2P52292 529 aaKnown RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ACY1Q03154 408 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 TMED2Q15363 201 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ANKRD22Q5VYY1 191 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 KIAA1614Q5VZ46 1190 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 MRNIPQ6NTE8 343 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 CASC4Q6P4E1 433 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 NAPRTQ6XQN6 538 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 SDCCAG8Q86SQ7 713 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 LDB1Q86U70 411 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 BPHLQ86WA6 291 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-213ENST00000482192 AMIGO1Q86WK6 493 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 LRRC6Q86X45 466 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 PPP1R3BQ86XI6 285 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 RASGRP3Q8IV61 690 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 SLC22A15Q8IZD6 547 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ESX1Q8N693 406 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 OTUD6BQ8N6M0 293 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 MCUQ8NE86 351 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ASZ1Q8WWH4 475 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 TTC9Q92623 222 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 MFSD3Q96ES6 412 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 ELMO2Q96JJ3 720 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 SAMD15Q9P1V8 674 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 POLG2Q9UHN1 485 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 GNPTGQ9UJJ9 305 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 POMT2Q9UKY4 750 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 RARRES3Q9UL19 164 aa11.55□□□□□ -0.56
HMGN1-213ENST00000482192 BPTFQ12830 3046 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 LAMA5O15230 3695 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 MAGEB16A2A368 324 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 SDR42E2A6NKP2 422 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 C2orf74A8MZ97 194 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 BTN3A3O00478 584 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 BTN3A1O00481 513 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 PFDN6O15212 129 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 KDM1AO60341 852 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 ITGB2P05107 769 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 EBLN1P0CF75 366 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 FOLR1P15328 257 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 ZNF28P17035 718 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 ITGB6P18564 788 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 WT1P19544 449 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-213ENST00000482192 CDH3P22223 829 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 RPS3P23396 243 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGN1-213ENST00000482192 ARNTP27540 789 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 GNG11P61952 73 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 TUBB4BP68371 445 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 ABHD18Q0P651 414 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 HSPA14Q0VDF9 509 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 PRKG2Q13237 762 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 TUBB2AQ13885 445 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 KCNAB1Q14722 419 aa11.54□□□□□ -0.56
HMGN1-213ENST00000482192 PPP1R7Q15435 360 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms