RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TMEM216Q9P0N5 145 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 LNPEPQ9UIQ6 1025 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 GPSM3Q9Y4H4 160 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 H3BM21 787 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 PRMT5O14744 637 aaPredicted RBP16.55■□□□□ 0.24
EPHB4-204ENST00000477446 PFDN6O15212 129 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 MYL2P10916 166 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 FGF3P11487 239 aaPredicted RBP16.55■□□□□ 0.24
EPHB4-204ENST00000477446 TCEA2Q15560 299 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 PRRT3Q5FWE3 981 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 PPM1JQ5JR12 505 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 C16orf46Q6P387 395 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 CHST15Q7LFX5 561 aaPredicted RBP16.55■□□□□ 0.24
EPHB4-204ENST00000477446 CLNKQ7Z7G1 428 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 BEND7Q8N7W2 519 aaPredicted RBP16.55■□□□□ 0.24
EPHB4-204ENST00000477446 LPGAT1Q92604 370 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 ZNF514Q96K75 400 aaPredicted RBP16.55■□□□□ 0.24
EPHB4-204ENST00000477446 OR2M4Q96R27 311 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 LRRC61Q9BV99 259 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 CLPBQ9H078 707 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 P2RY12Q9H244 342 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 CRYL1Q9Y2S2 319 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 PLEKHM1Q9Y4G2 1056 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 ST14Q9Y5Y6 855 aa16.55■□□□□ 0.24
EPHB4-204ENST00000477446 EP300Q09472 2414 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 ZFC3H1O60293 1989 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 UBA6A0AVT1 1052 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 CDX4O14627 284 aaPredicted RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 KMOO15229 486 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 PIAS2O75928 621 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 HAUS5O94927 633 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 AP2A2O94973 939 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 AHSGP02765 367 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 CTSEP14091 401 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 GABRB3P28472 473 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 LEPRP48357 1165 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 SLC1A6P48664 564 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 PRLHRP49683 370 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 KPNA2P52292 529 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 C1orf61Q13536 156 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 USP10Q14694 798 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 PCLAFQ15004 111 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 TBCCQ15814 346 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 BCL7AQ4VC05 210 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 C11orf96Q7Z7L8 435 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 CCL4L1Q8NHW4 92 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 MAGEC3Q8TD91 643 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 BIRC8Q96P09 236 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 EDEM2Q9BV94 578 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 NMRAL1Q9HBL8 299 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 UCKL1Q9NWZ5 548 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 TRNAU1APQ9NX07 287 aaKnown RBP16.54■□□□□ 0.24
EPHB4-204ENST00000477446 SPASTQ9UBP0 616 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 SLC23A2Q9UGH3 650 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 VPS9D1Q9Y2B5 631 aa16.54■□□□□ 0.24
EPHB4-204ENST00000477446 CABIN1Q9Y6J0 2220 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 TMEM114B3SHH9 223 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CELA2BP08218 269 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 ACP5P13686 325 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 RPS3P23396 243 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■□□□□ 11.3
EPHB4-204ENST00000477446 DGKAP23743 735 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 FMO4P31512 558 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CD151P48509 253 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CCT8P50990 548 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 ADARP55265 1226 aaKnown RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CTBSQ01459 385 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 POU4F1Q01851 419 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 ASPHQ12797 758 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 SNCBQ16143 134 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 TSNAXIP1Q2TAA8 658 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 PLA2G4EQ3MJ16 856 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 AASDHQ4L235 1098 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CNSTQ6PJW8 725 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 RAPH1Q70E73 1250 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CMC1Q7Z7K0 106 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 OR6Y1Q8NGX8 325 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 LMX1AQ8TE12 382 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 NSL1Q96IY1 281 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 DNAAF2Q9NVR5 837 aaKnown RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.53■□□□□ 0.24
EPHB4-204ENST00000477446 SLC39A10Q9ULF5 831 aa16.53■□□□□ 0.24
EPHB4-204ENST00000477446 A0A087X1B8 175 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 YKT6O15498 198 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 AQP9O43315 295 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 FOXD2O60548 495 aaPredicted RBP16.52■□□□□ 0.24
EPHB4-204ENST00000477446 GFRA3O60609 400 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 POP7O75817 140 aaKnown RBP16.52■□□□□ 0.24
EPHB4-204ENST00000477446 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.24
EPHB4-204ENST00000477446 OR56A5P0C7T3 313 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 AK4P27144 223 aaPredicted RBP16.52■□□□□ 0.24
EPHB4-204ENST00000477446 PTPN4P29074 926 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 HK2P52789 917 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 CTSL3PQ5NE16 218 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 NRROSQ86YC3 692 aa16.52■□□□□ 0.24
EPHB4-204ENST00000477446 GATAD2AQ86YP4 633 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms