RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 MATN2O00339 956 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 PDHA2P29803 388 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 CASRP41180 1078 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 CD151P48509 253 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 RPA4Q13156 261 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 PIANPQ8IYJ0 282 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 PHC3Q8NDX5 983 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 RUFY1Q96T51 708 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 TLR10Q9BXR5 811 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 C1GALT1Q9NS00 363 aa21.91■■□□□ 1.1
C9orf3-213ENST00000471978 MKRN2OSH3BPM6 223 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 PREPP48147 710 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 RPS15P62841 145 aaKnown RBP21.9■■□□□ 1.1
C9orf3-213ENST00000471978 DBN1Q16643 649 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 LINC00523Q86TU6 105 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 GAS2L3Q86XJ1 694 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 MR1Q95460 341 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 HES6Q96HZ4 224 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 TFB2MQ9H5Q4 396 aaKnown RBP21.9■■□□□ 1.1
C9orf3-213ENST00000471978 MVB12BQ9H7P6 319 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 FANCEQ9HB96 536 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 SMARCAL1Q9NZC9 954 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 TP53TG5Q9Y2B4 290 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 MAN2B2Q9Y2E5 1009 aa21.9■■□□□ 1.1
C9orf3-213ENST00000471978 CCDC78A2IDD5 438 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 MROH6A6NGR9 719 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 BTN3A3O00478 584 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 RFPL1O75677 317 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 AP2A2O94973 939 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 GSTM1P09488 218 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 PTPN4P29074 926 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 PRDX3P30048 256 aaKnown RBP21.89■■□□□ 1.09
C9orf3-213ENST00000471978 RPS18P62269 152 aaKnown RBP21.89■■□□□ 1.09
C9orf3-213ENST00000471978 GSTM4Q03013 218 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 OR52E1Q8NGJ3 308 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 ATG4AQ8WYN0 398 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 SEC14L1Q92503 715 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 TFGQ92734 400 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-213ENST00000471978 NRTNQ99748 197 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 LATS2Q9NRM7 1088 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 CAPN6Q9Y6Q1 641 aa21.89■■□□□ 1.09
C9orf3-213ENST00000471978 BTN3A1O00481 513 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 ARHGAP6O43182 974 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 NR1D1P20393 614 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 MSNP26038 577 aaKnown RBP21.88■■□□□ 1.09
C9orf3-213ENST00000471978 NSG1P42857 185 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 PMS2P54278 862 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 GPS2Q13227 327 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 PRKG2Q13237 762 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 BOP1Q14137 746 aaKnown RBP21.88■■□□□ 1.09
C9orf3-213ENST00000471978 CCDC38Q502W7 563 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 AMIGO1Q86WK6 493 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 SLC38A9Q8NBW4 561 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 HGH1Q9BTY7 390 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 TLK1Q9UKI8 766 aa21.88■■□□□ 1.09
C9orf3-213ENST00000471978 FARSAQ9Y285 508 aaKnown RBP21.88■■□□□ 1.09
C9orf3-213ENST00000471978 K7EM74 188 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 MAP3K7O43318 606 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 KLK3P07288 261 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-213ENST00000471978 PSMA3P25788 255 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 STIP1P31948 543 aaKnown RBP21.87■■□□□ 1.09
C9orf3-213ENST00000471978 KLRB1Q12918 225 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 UGT8Q16880 541 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 PRAMEF17Q5VTA0 474 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 TCTN3Q6NUS6 607 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 SYVN1Q86TM6 617 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 DNAAF3Q8N9W5 541 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 SPC24Q8NBT2 197 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 OR52K1Q8NGK4 314 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 CPT1BQ92523 772 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 PITPNM3Q9BZ71 974 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 XKR8Q9H6D3 395 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 SYTL2Q9HCH5 934 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 IMPACTQ9P2X3 320 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 PRSS21Q9Y6M0 314 aa21.87■■□□□ 1.09
C9orf3-213ENST00000471978 OR51F1A6NGY5 319 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 ERI2A8K979 691 aaKnown RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 C2orf74A8MZ97 194 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 TMEM150CB9EJG8 249 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 LIN7AO14910 233 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 ST6GAL1P15907 406 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 GSDMDP57764 484 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 CDH17Q12864 832 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 ABRQ12979 859 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 SEMA5AQ13591 1074 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 LAMB3Q13751 1172 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 ITIH4Q14624 930 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 COLEC12Q5KU26 742 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 ZNF517Q6ZMY9 492 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 APLFQ8IW19 511 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 RNF10Q8N5U6 811 aaKnown RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 OR1L3Q8NH93 324 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 THAP4Q8WY91 577 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 CLIP3Q96DZ5 547 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 LRFN5Q96NI6 719 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 CHST8Q9H2A9 424 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 SPENQ96T58 3664 aaKnown RBP21.86■■□□□ 1.09
C9orf3-213ENST00000471978 RELNP78509 3460 aa21.86■■□□□ 1.09
C9orf3-213ENST00000471978 CCDC162PA2VCL2 907 aa21.85■■□□□ 1.09
C9orf3-213ENST00000471978 MEN1O00255 615 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms