RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 LKAAEAR1Q8TD35 194 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 APOBEC4Q8WW27 367 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 C1orf54Q8WWF1 131 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 KIAA1143Q96AT1 154 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 STAMBPL1Q96FJ0 436 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 CDKN2AIPNLQ96HQ2 116 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 MRFAP1L1Q96HT8 127 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 LINC00615Q96LM1 132 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 FERD3LQ96RJ6 166 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 SRPK1Q96SB4 655 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 SPRTNQ9H040 489 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 KIR3DX1Q9H7L2 352 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 COG4Q9H9E3 785 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 ARNT2Q9HBZ2 717 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 KCND1Q9NSA2 647 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 CRLS1Q9UJA2 301 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 RARRES3Q9UL19 164 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 DNMT3AQ9Y6K1 912 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 CAPN6Q9Y6Q1 641 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 SPTBN1Q01082 2364 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 MROH6A6NGR9 719 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ARGFXA6NJG6 315 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 IQCF5A8MTL0 148 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 BTNL10A8MVZ5 291 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 BHMG1C9JSJ3 638 aaPredicted RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 CNOT3O75175 753 aaKnown RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 NUDT7P0C024 238 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 RNF224P0DH78 156 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 CBSLP0DN79 551 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 VCLP18206 1134 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PTMSP20962 102 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ACRV1P26436 265 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PEBP1P30086 187 aaKnown RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 CBSP35520 551 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 CASRP41180 1078 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 UQCRFS1P47985 274 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PRLHRP49683 370 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 CCL11P51671 97 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ITGA1P56199 1179 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 YBX1P67809 324 aaKnown RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 HSD11B2P80365 405 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 SEPT6Q14141 434 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 MAP7Q14244 749 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PARP6Q2NL67 630 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 DEFB110Q30KQ9 67 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PTCHD3Q3KNS1 767 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 NADK2Q4G0N4 442 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PRR30Q53SZ7 412 aaPredicted RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 ITPRIPL1Q6GPH6 555 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 CDHR3Q6ZTQ4 885 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ZNF534Q76KX8 674 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 RBM12BQ8IXT5 1001 aaKnown RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 AVL9Q8NBF6 648 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 OR52E1Q8NGJ3 308 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 OR13J1Q8NGT2 312 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 LCN9Q8WX39 176 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 MR1Q95460 341 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ZNF514Q96K75 400 aaPredicted RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 TRAPPC9Q96Q05 1148 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 COPS8Q99627 209 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 MESP1Q9BRJ9 268 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 CCM2Q9BSQ5 444 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 HGH1Q9BTY7 390 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ADNPQ9H2P0 1102 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 TRIT1Q9H3H1 467 aaKnown RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 ETNK1Q9HBU6 452 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 NLE1Q9NVX2 485 aaPredicted RBP7.84□□□□□ -1.15
USP48-207ENST00000471752 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 SMARCAL1Q9NZC9 954 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 LUZP4Q9P127 313 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 IMPACTQ9P2X3 320 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 AMFRQ9UKV5 643 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 POMT2Q9UKY4 750 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ACSL5Q9ULC5 683 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 ICKQ9UPZ9 632 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 PCDHGA6Q9Y5G7 932 aa7.84□□□□□ -1.15
USP48-207ENST00000471752 TNRC6AQ8NDV7 1962 aaKnown RBP7.83□□□□□ -1.16
USP48-207ENST00000471752 GSAPA4D1B5 854 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 TLCD2A6NGC4 264 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 A6NL46 340 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 TMEM150CB9EJG8 249 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 H3BMH7 237 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 NRP2O60462 931 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 KCNJ13O60928 360 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SCRG1O75711 98 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 TJP3O95049 919 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SLC35G4P0C7Q5 338 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 ACADLP28330 430 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 PTPN4P29074 926 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 FOXN2P32314 431 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 RORAP35398 523 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 PTGIRP43119 386 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 GABRA4P48169 554 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 TUBB4BP68371 445 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 CRADDP78560 199 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SEMA5AQ13591 1074 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 SNX1Q13596 522 aa7.83□□□□□ -1.16
USP48-207ENST00000471752 RAPSNQ13702 412 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms