RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 KCND1Q9NSA2 647 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 LNPEPQ9UIQ6 1025 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 PCDHGA6Q9Y5G7 932 aa17.38■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF106Q9H2Y7 1883 aaKnown RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 HEATR9A2RTY3 570 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 SLC9B1P1A6NJY1 282 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 SUV39H1O43463 412 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 SLC28A2O43868 658 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 RECKO95980 971 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 MT-ND3P03897 115 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 NTRK1P04629 796 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ZSCAN5DPP0CG00 497 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ACADLP28330 430 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 PRDX3P30048 256 aaKnown RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 RPL22P35268 128 aaKnown RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 PREPP48147 710 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 TUBB4BP68371 445 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 NFKB2Q00653 900 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ACVR1Q04771 509 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 KCNAB2Q13303 367 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 LAMB3Q13751 1172 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 BOP1Q14137 746 aaKnown RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 DEFB109BQ30KR1 87 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 TSTD2Q5T7W7 516 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ATP1A1-AS1Q5TC04 95 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 C16orf46Q6P387 395 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF449Q6P9G9 518 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 DRICH1Q6PGQ1 229 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 PACS1Q6VY07 963 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF501Q96CX3 271 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 C1GALT1Q9NS00 363 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 TUBD1Q9UJT1 453 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 POMT2Q9UKY4 750 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 BTRCQ9Y297 605 aa17.37■□□□□ 0.37
CPNE1-213ENST00000434795 FLNBO75369 2602 aaKnown RBP17.37■□□□□ 0.37
CPNE1-213ENST00000434795 BHMG1C9JSJ3 638 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-213ENST00000434795 IFRD1O00458 451 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-213ENST00000434795 LIN7AO14910 233 aaPredicted RBP17.36■□□□□ 0.37
CPNE1-213ENST00000434795 KATNA1O75449 491 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 GAS8O95995 478 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 FURINP09958 794 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 LMAN1P49257 510 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 PRKAA1Q13131 559 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 PRKG2Q13237 762 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 GPR19Q15760 415 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 PPP1R21Q6ZMI0 780 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF534Q76KX8 674 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 LRRC8AQ8IWT6 810 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 SLC38A9Q8NBW4 561 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 OR52E1Q8NGJ3 308 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 APOBEC4Q8WW27 367 aaKnown RBP17.36■□□□□ 0.37
CPNE1-213ENST00000434795 SGSM3Q96HU1 749 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 PAK5Q9P286 719 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 KCND3Q9UK17 655 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 PCDHB3Q9Y5E6 796 aa17.36■□□□□ 0.37
CPNE1-213ENST00000434795 SLC5A10A0PJK1 596 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 E7EVH7 732 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 MATN2O00339 956 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 OR1I1O60431 355 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 GOT2P00505 430 aaKnown RBP17.35■□□□□ 0.37
CPNE1-213ENST00000434795 TPBGLP0DKB5 382 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 ERV3-1Q14264 604 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 TMTC4Q5T4D3 741 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 LYPLAL1Q5VWZ2 237 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 FAM199XQ6PEV8 388 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-213ENST00000434795 NAPRTQ6XQN6 538 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 NLRP9Q7RTR0 991 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 AMIGO1Q86WK6 493 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 ADGRF3Q8IZF5 1079 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 OR4L1Q8NH43 312 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 OR8K5Q8NH50 307 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 CT55Q8WUE5 264 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 TLR10Q9BXR5 811 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 XKR8Q9H6D3 395 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 LZTFL1Q9NQ48 299 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 HEMK1Q9Y5R4 338 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-213ENST00000434795 KCNMB2Q9Y691 235 aa17.35■□□□□ 0.37
CPNE1-213ENST00000434795 PYCARD-AS1I3L0S3 204 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 QSOX1O00391 747 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 BTN3A1O00481 513 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 CREG1O75629 220 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 APRTP07741 180 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 CDH3P22223 829 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 DNASE1L3Q13609 305 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 BRD3Q15059 726 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 ZNF517Q6ZMY9 492 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-213ENST00000434795 SETXQ7Z333 2677 aaKnown RBP17.34■□□□□ 0.37
CPNE1-213ENST00000434795 CCDC89Q8N998 374 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 ELMO1Q92556 727 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 TRAPPC9Q96Q05 1148 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 GPR87Q9BY21 358 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 PITPNM3Q9BZ71 974 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 CHRAC1Q9NRG0 131 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 LATS2Q9NRM7 1088 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 TCAF1Q9Y4C2 921 aa17.34■□□□□ 0.37
CPNE1-213ENST00000434795 PIPSLA2A3N6 862 aa17.33■□□□□ 0.36
CPNE1-213ENST00000434795 C21orf140B9A014 251 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms