RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PREPP48147 710 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 MRPS25P82663 173 aaKnown RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 GSTM4Q03013 218 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 SQSTM1Q13501 440 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 KRT33BQ14525 404 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 BRD3Q15059 726 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 SYTL3Q4VX76 610 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 DNAJC21Q5F1R6 531 aaKnown RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 SNAP47Q5SQN1 464 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 MRNIPQ6NTE8 343 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 TMEM71Q6P5X7 295 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 NAPRTQ6XQN6 538 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 SDCCAG8Q86SQ7 713 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 HOOK3Q86VS8 718 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 RCBTB1Q8NDN9 531 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 SPATA4Q8NEY3 305 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 OR4D9Q8NGE8 314 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 EXTL1Q92935 676 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 TRIM44Q96DX7 344 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 STAMBPL1Q96FJ0 436 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 EPB41L1Q9H4G0 881 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 AKAP7Q9P0M2 348 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 KLHL3Q9UH77 587 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 RPS6KL1Q9Y6S9 549 aa14.84□□□□□ -0.03
PTCD1-204ENST00000430982 ZFC3H1O60293 1989 aaKnown RBP14.84□□□□□ -0.03
PTCD1-204ENST00000430982 UBA6A0AVT1 1052 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 A8MU76 341 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 EFCAB8A8MWE9 144 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 IFRD1O00458 451 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PRMT5O14744 637 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PLD2O14939 933 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 JMJD7P0C870 316 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 IVDP26440 423 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PDHA2P29803 388 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 LIMK2P53671 638 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 CSE1LP55060 971 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 DHX9Q08211 1270 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 EIF3IQ13347 325 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 THOC5Q13769 683 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 BOP1Q14137 746 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 C16orf72Q14CZ0 275 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 MORF4L2Q15014 288 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PLCL1Q15111 1095 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 BBS9Q3SYG4 887 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 ZNF658BQ4V348 819 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PTRHD1Q6GMV3 140 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 CAPRIN2Q6IMN6 1127 aaKnown RBP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.04
PTCD1-204ENST00000430982 ZNF592Q92610 1267 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 SNF8Q96H20 258 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 SIGLEC10Q96LC7 697 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 CMKLR1Q99788 373 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 TSSK1BQ9BXA7 367 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 OR52A5Q9H2C5 316 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 IL1RAPL1Q9NZN1 696 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 PISDQ9UG56 409 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 HEBP2Q9Y5Z4 205 aa14.83□□□□□ -0.04
PTCD1-204ENST00000430982 IQCF5A8MTL0 148 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 PFDN6O15212 129 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 BANF1O75531 89 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 FAM87AP0C7U9 286 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 THRAP10827 490 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 ARCN1P48444 511 aaKnown RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 ITGA8P53708 1063 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 EIF3BP55884 814 aaKnown RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 RPA4Q13156 261 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 SRSF6Q13247 344 aaKnown RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 TRA2AQ13595 282 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 UBAP2LQ14157 1087 aaKnown RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 NEPROQ6NW34 567 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 WDR74Q6RFH5 385 aaPredicted RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 TMEM135Q86UB9 458 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 KRT222Q8N1A0 295 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 LKAAEAR1Q8TD35 194 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 RSC1A1Q92681 617 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 TMEM159Q96B96 161 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 FERD3LQ96RJ6 166 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 C20orf96Q9NUD7 363 aaPredicted RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.82□□□□□ -0.04
PTCD1-204ENST00000430982 OGFRQ9NZT2 677 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 GNPTGQ9UJJ9 305 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 SNX24Q9Y343 169 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 COLEC10Q9Y6Z7 277 aa14.82□□□□□ -0.04
PTCD1-204ENST00000430982 ZCWPW2A0A1B0GU75 182 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 FAM187AA6NFU0 413 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
PTCD1-204ENST00000430982 URI1O94763 535 aaPredicted RBP14.81□□□□□ -0.04
PTCD1-204ENST00000430982 USP1O94782 785 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 SEC31AO94979 1220 aaKnown RBP14.81□□□□□ -0.04
PTCD1-204ENST00000430982 PGAM1P18669 254 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 ITIH1P19827 911 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 OGNP20774 298 aaKnown RBP14.81□□□□□ -0.04
PTCD1-204ENST00000430982 NDUFS1P28331 727 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 FMO4P31512 558 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 SLC5A2P31639 672 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 CSTF2P33240 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTCD1-204ENST00000430982 MAPK10P53779 464 aa14.81□□□□□ -0.04
PTCD1-204ENST00000430982 GFERP55789 205 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms