RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PRAMEF17Q5VTA0 474 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 CARFQ8N187 725 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 CLDN19Q8N6F1 224 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 PHC3Q8NDX5 983 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 C19orf43Q9BQ61 176 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 DESI2Q9BSY9 194 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 TRIM55Q9BYV6 548 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 KCND1Q9NSA2 647 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 TLK1Q9UKI8 766 aa16.6■□□□□ 0.25
TRIM39-209ENST00000428728 C17orf113A0A1B0GUU1 675 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 TCRBV7S2A1N4TA0A589 114 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 CYSRT1A8MQ03 144 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 TMEM150CB9EJG8 249 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 H7C0S8 307 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 BTN3A1O00481 513 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 ST6GAL1P15907 406 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 PTPN4P29074 926 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 LMAN1P49257 510 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 RPS15P62841 145 aaKnown RBP16.59■□□□□ 0.25
TRIM39-209ENST00000428728 FOXK1P85037 733 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 KLRB1Q12918 225 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 CHAF1BQ13112 559 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 PRKG2Q13237 762 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 DBN1Q16643 649 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 P3H1Q32P28 736 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-209ENST00000428728 CPZQ66K79 652 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 ZNF449Q6P9G9 518 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 ASB18Q6ZVZ8 466 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 PIANPQ8IYJ0 282 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 SLC38A9Q8NBW4 561 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 OR52E1Q8NGJ3 308 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 OR8K5Q8NH50 307 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-209ENST00000428728 GPR87Q9BY21 358 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 KLHL25Q9H0H3 589 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 CHST8Q9H2A9 424 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 XKR8Q9H6D3 395 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 LATS2Q9NRM7 1088 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 C1GALT1Q9NS00 363 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 SMARCAL1Q9NZC9 954 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 NBASA2RRP1 2371 aa16.59■□□□□ 0.25
TRIM39-209ENST00000428728 UBR5O95071 2799 aaPredicted RBP16.59■□□□□ 0.25
TRIM39-209ENST00000428728 OR51F1A6NGY5 319 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 MIF4GDA9UHW6 222 aaKnown RBP16.58■□□□□ 0.24
TRIM39-209ENST00000428728 MATN2O00339 956 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 BTN3A3O00478 584 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 AP2A1O95782 977 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 PVRP15151 417 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 CACNG1Q06432 222 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 KLF1Q13351 362 aaPredicted RBP16.58■□□□□ 0.24
TRIM39-209ENST00000428728 BRD3Q15059 726 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 UGT8Q16880 541 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 CCDC38Q502W7 563 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 TCTN3Q6NUS6 607 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 SYVN1Q86TM6 617 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 TMEM139Q8IV31 216 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 TEX19Q8NA77 164 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 SLC35B2Q8TB61 432 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 STYXQ8WUJ0 223 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 ATG4AQ8WYN0 398 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 CPT1BQ92523 772 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 CLIP3Q96DZ5 547 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 CDKN2AIPNLQ96HQ2 116 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 ALS2CR12Q96Q35 445 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 NUP210LQ5VU65 1888 aa16.58■□□□□ 0.24
TRIM39-209ENST00000428728 PTPN13Q12923 2485 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 PDGFAP04085 211 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 KLK3P07288 261 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 CYP2A7P20853 494 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 PRDX3P30048 256 aaKnown RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 GSDMDP57764 484 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 KIF5AQ12840 1032 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 SEMA5AQ13591 1074 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 LAMB3Q13751 1172 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 LCN10Q6JVE6 187 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 APLFQ8IW19 511 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 OR1L3Q8NH93 324 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 TFGQ92734 400 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 MVB12BQ9H7P6 319 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 PLAAQ9Y263 795 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 FARSAQ9Y285 508 aaKnown RBP16.57■□□□□ 0.24
TRIM39-209ENST00000428728 PRSS21Q9Y6M0 314 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 CAPN6Q9Y6Q1 641 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 SEC16AO15027 2179 aa16.57■□□□□ 0.24
TRIM39-209ENST00000428728 ARGFXA6NJG6 315 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 PSMD3O43242 534 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 RECKO95980 971 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 CD151P48509 253 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 RPA4Q13156 261 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 BOP1Q14137 746 aaKnown RBP16.56■□□□□ 0.24
TRIM39-209ENST00000428728 PLEKHS1Q5SXH7 462 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 FAM69BQ5VUD6 431 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 NAPRTQ6XQN6 538 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
TRIM39-209ENST00000428728 AMIGO1Q86WK6 493 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms