RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 UGT3A1Q6NUS8 523 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 TTC23LQ6PF05 361 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 TMEM26Q6ZUK4 368 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 PDZD3Q86UT5 571 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 OR4E2Q8NGC2 313 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 INPP5DQ92835 1189 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 SLC30A3Q99726 388 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 PHACTR1Q9C0D0 580 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 TRIT1Q9H3H1 467 aaKnown RBP14.21□□□□□ -0.13
SGCE-204ENST00000428696 CDC42EP4Q9H3Q1 356 aaKnown RBP14.21□□□□□ -0.13
SGCE-204ENST00000428696 TAS2R13Q9NYV9 303 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 KLHL3Q9UH77 587 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 CIDEBQ9UHD4 219 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 CLCA2Q9UQC9 943 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 VWA7Q9Y334 891 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 COMMD10Q9Y6G5 202 aa14.21□□□□□ -0.13
SGCE-204ENST00000428696 ARHGEF17Q96PE2 2063 aaPredicted RBP14.21□□□□□ -0.14
SGCE-204ENST00000428696 A8MU76 341 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 FAM155BO75949 473 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 UBXN7O94888 489 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 NDUFS1P28331 727 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 CD1CP29017 333 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 ECHS1P30084 290 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 PGGT1BP53609 377 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 TARDBPQ13148 414 aaKnown RBP eCLIP14.2□□□□□ -0.14
SGCE-204ENST00000428696 PDAP1Q13442 181 aaKnown RBP14.2□□□□□ -0.14
SGCE-204ENST00000428696 EFTUD2Q15029 972 aaKnown RBP eCLIP14.2□□□□□ -0.14
SGCE-204ENST00000428696 ZNF658BQ4V348 819 aaPredicted RBP14.2□□□□□ -0.14
SGCE-204ENST00000428696 HECTD2Q5U5R9 776 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 ARMC6Q6NXE6 501 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 FOXR1Q6PIV2 292 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 XKR5Q6UX68 686 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 RBM44Q6ZP01 1051 aaKnown RBP14.2□□□□□ -0.14
SGCE-204ENST00000428696 SLC26A11Q86WA9 606 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 SLC22A15Q8IZD6 547 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 GALNT15Q8N3T1 639 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 OR5AR1Q8NGP9 310 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 LCN9Q8WX39 176 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 FOPNLQ96NB1 174 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 LATS2Q9NRM7 1088 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 PLAGL1Q9UM63 463 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 SPEGQ15772 3267 aa14.2□□□□□ -0.14
SGCE-204ENST00000428696 IGHV1OR21-1A0A087WYE8 117 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 A0A1W2PQM1 296 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 OR6C74A6NCV1 312 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 FAM159BA6NKW6 160 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 DUX1O43812 170 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 CSO75390 466 aaKnown RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 GPC4O75487 556 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 SLCO2B1O94956 709 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 PROS1P07225 676 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 CLCN7P51798 805 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 PMS2P54278 862 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 ERCC6LQ2NKX8 1250 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 KLHL38Q2WGJ6 581 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 UBAP2Q5T6F2 1119 aaKnown RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 RAB44Q7Z6P3 723 aaPredicted RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 ZC3HC1Q86WB0 502 aaKnown RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 TMPRSS12Q86WS5 348 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 RBM12BQ8IXT5 1001 aaKnown RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 CPNE9Q8IYJ1 553 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 KCNJ9Q92806 393 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 NUDT22Q9BRQ3 303 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 XKR8Q9H6D3 395 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 ANKZF1Q9H8Y5 726 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 SLC39A10Q9ULF5 831 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 CDYLQ9Y232 598 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 MTO1Q9Y2Z2 717 aaKnown RBP14.19□□□□□ -0.14
SGCE-204ENST00000428696 DHRS7Q9Y394 339 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 IKBKGQ9Y6K9 419 aa14.19□□□□□ -0.14
SGCE-204ENST00000428696 COL5A1P20908 1838 aaPredicted RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 FAM95CA0A1B0GW59 222 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 MED19A0JLT2 244 aaPredicted RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 POC1B-GALNT4F8VUJ3 575 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 CPNE6O95741 557 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 RPN2P04844 631 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 HOXB3P14651 431 aaPredicted RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 ACADLP28330 430 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SKIV2L2P42285 1042 aaKnown RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 GPLD1P80108 840 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 FAM45BPQ6NSW5 357 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 IRGCQ6NXR0 463 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 PAQR3Q6TCH7 311 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 ZNF438Q7Z4V0 828 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 C2orf73Q8N5S3 287 aaPredicted RBP14.18□□□□□ -0.14
SGCE-204ENST00000428696 ACVR1CQ8NER5 493 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 WDR48Q8TAF3 677 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 FAM45AQ8TCE6 357 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 EEF1AKMT1Q8WVE0 214 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 TGM7Q96PF1 710 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 DEPDC7Q96QD5 511 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 CYTH2Q99418 400 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 NRTNQ99748 197 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 CPNE1Q99829 537 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SCNM1Q9BWG6 230 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SEMA6CQ9H3T2 930 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 SRMSQ9H3Y6 488 aa14.18□□□□□ -0.14
SGCE-204ENST00000428696 KIR3DX1Q9H7L2 352 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms