RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 OR1I1O60431 355 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 RAD1O60671 282 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 PDHA2P29803 388 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 COILP38432 576 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 PPP1CAP62136 330 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 SRSF6Q13247 344 aaKnown RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 BRD3Q15059 726 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 KCTD19Q17RG1 926 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 LINC00303Q3SY05 128 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 ZNF658BQ4V348 819 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 CACNA2D3Q8IZS8 1091 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 OTUD6BQ8N6M0 293 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 OR4E2Q8NGC2 313 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 ACTRT1Q8TDG2 376 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 GRK7Q8WTQ7 553 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 LCN9Q8WX39 176 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 KLHL6Q8WZ60 621 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 TFGQ92734 400 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 NKD1Q969G9 470 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 OR6C1Q96RD1 312 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 FAM117AQ9C073 453 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 SRMSQ9H3Y6 488 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 MVB12BQ9H7P6 319 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 SNX12Q9UMY4 172 aa21.33■■□□□ 1.01
TRAF4-204ENST00000422344 HEMK1Q9Y5R4 338 aaPredicted RBP21.33■■□□□ 1.01
TRAF4-204ENST00000422344 TLN1Q9Y490 2541 aaKnown RBP21.32■■□□□ 1
TRAF4-204ENST00000422344 TLCD2A6NGC4 264 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 CD3EAPO15446 510 aaKnown RBP21.32■■□□□ 1
TRAF4-204ENST00000422344 TTPAP49638 278 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 SH3BP2P78314 561 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 PLOD1Q02809 727 aaPredicted RBP21.32■■□□□ 1
TRAF4-204ENST00000422344 CYP1B1Q16678 543 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 SIDT2Q8NBJ9 832 aaKnown RBP21.32■■□□□ 1
TRAF4-204ENST00000422344 TREX1Q9NSU2 369 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 SYBUQ9NX95 663 aa21.32■■□□□ 1
TRAF4-204ENST00000422344 TCRBV7S3A2A0A539 114 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 MATN2O00339 956 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 CES2O00748 559 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 PHF2O75151 1096 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 STK17BO94768 372 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 NELFEP18615 380 aaKnown RBP21.31■■□□□ 1
TRAF4-204ENST00000422344 NMBRP28336 390 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 SEMA3AQ14563 771 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 IL11RAQ14626 422 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 KCNJ11Q14654 390 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 CASC4Q6P4E1 433 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 KMT5CQ86Y97 462 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 RASGRP3Q8IV61 690 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 NLGN4XQ8N0W4 816 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 PHC3Q8NDX5 983 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 NLGN4YQ8NFZ3 816 aaPredicted RBP21.31■■□□□ 1
TRAF4-204ENST00000422344 EXTL1Q92935 676 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 ELMO2Q96JJ3 720 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 MAP3K3Q99759 626 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 ARHGAP9Q9BRR9 750 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 HGH1Q9BTY7 390 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 TRIM4Q9C037 500 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 MRM3Q9HC36 420 aaKnown RBP21.31■■□□□ 1
TRAF4-204ENST00000422344 PILRAQ9UKJ1 303 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 ASF1AQ9Y294 204 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 SDK2Q58EX2 2172 aa21.31■■□□□ 1
TRAF4-204ENST00000422344 IGHV5-51A0A0C4DH38 117 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 GSAPA4D1B5 854 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 ITGB6P18564 788 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 POLR2CP19387 275 aaPredicted RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 MAP4P27816 1152 aaKnown RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 MAGEA6P43360 314 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 ARCN1P48444 511 aaKnown RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 LDB1Q86U70 411 aaPredicted RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 MPP5Q8N3R9 675 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 KIAA1143Q96AT1 154 aaPredicted RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 KIFC1Q9BW19 673 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 ULBP3Q9BZM4 244 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 TRIT1Q9H3H1 467 aaKnown RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 PDE7BQ9NP56 450 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 SAMD15Q9P1V8 674 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 MARCH4Q9P2E8 410 aaPredicted RBP21.3■■□□□ 1
TRAF4-204ENST00000422344 SOX13Q9UN79 622 aa21.3■■□□□ 1
TRAF4-204ENST00000422344 PRMT5O14744 637 aaPredicted RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 ZNF185O15231 689 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 NDUFS3O75489 264 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 VAPBO95292 243 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 TCP1P17987 556 aaKnown RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 PAMP19021 973 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 FNTAP49354 379 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 CSE1LP55060 971 aaKnown RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 PRKG2Q13237 762 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 TUBB3Q13509 450 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 TMED2Q15363 201 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 ARMC3Q5W041 872 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 PTRHD1Q6GMV3 140 aaKnown RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 NAPRTQ6XQN6 538 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 SDCCAG8Q86SQ7 713 aaPredicted RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 CARFQ8N187 725 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 OR52E1Q8NGJ3 308 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 CPT1BQ92523 772 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 SLC41A2Q96JW4 573 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
TRAF4-204ENST00000422344 TFB2MQ9H5Q4 396 aaKnown RBP21.29■■□□□ 1
TRAF4-204ENST00000422344 XAB2Q9HCS7 855 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms