RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PTPN13Q12923 2485 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 SLC9B1P1A6NJY1 282 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 SUV39H1O43463 412 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 OR1I1O60431 355 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 ZBTB11O95625 1053 aaPredicted RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 TPBGLP0DKB5 382 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 ST6GAL1P15907 406 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 TCN2P20062 427 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 CCR10P46092 362 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 HSD11B2P80365 405 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 CDH17Q12864 832 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 GPS2Q13227 327 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 BOP1Q14137 746 aaKnown RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 CRTC2Q53ET0 693 aaPredicted RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 FAM199XQ6PEV8 388 aaPredicted RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 PACS1Q6VY07 963 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 PTRH1Q86Y79 214 aaKnown RBP14.67□□□□□ -0.06
UBXN4-203ENST00000416538 TXLNBQ8N3L3 684 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 HEXDCQ8WVB3 486 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 ZFPM2Q8WW38 1151 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 CATSPER2Q96P56 530 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 FERD3LQ96RJ6 166 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 KLHL25Q9H0H3 589 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 CASS4Q9NQ75 786 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 ICKQ9UPZ9 632 aa14.67□□□□□ -0.06
UBXN4-203ENST00000416538 UBR5O95071 2799 aaPredicted RBP14.66□□□□□ -0.06
UBXN4-203ENST00000416538 K7EM74 188 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 GOT2P00505 430 aaKnown RBP14.66□□□□□ -0.06
UBXN4-203ENST00000416538 NR1D1P20393 614 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ACADLP28330 430 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 NDUFS1P28331 727 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TUBB4BP68371 445 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ACY1Q03154 408 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ACVR1Q04771 509 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 PRKG2Q13237 762 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TUBB2AQ13885 445 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ERV3-1Q14264 604 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ITIH4Q14624 930 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TSTD2Q5T7W7 516 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 LCN10Q6JVE6 187 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 ADGRF3Q8IZF5 1079 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 OR5AR1Q8NGP9 310 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 FLVCR1-AS1Q8TAF5 88 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 LCN9Q8WX39 176 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 HDAC10Q969S8 669 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 EFHD1Q9BUP0 239 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TUBB2BQ9BVA1 445 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 PITPNM3Q9BZ71 974 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 TSGA10Q9BZW7 698 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 FAM117AQ9C073 453 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 PDE7BQ9NP56 450 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 RAB6BQ9NRW1 208 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 SOHLH2Q9NX45 425 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 PCDHGA6Q9Y5G7 932 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 HEBP2Q9Y5Z4 205 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 KCNMB2Q9Y691 235 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 COLEC10Q9Y6Z7 277 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 PCM1Q15154 2024 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 DOPEY2Q9Y3R5 2298 aa14.66□□□□□ -0.06
UBXN4-203ENST00000416538 SLC5A10A0PJK1 596 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 GSAPA4D1B5 854 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 ERI2A8K979 691 aaKnown RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 BHMG1C9JSJ3 638 aaPredicted RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 SNPHO15079 494 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 PSMD3O43242 534 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 HCRTR1O43613 425 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 KRT86O43790 486 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 KATNA1O75449 491 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 AP2A2O94973 939 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 CDH3P22223 829 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 STIP1P31948 543 aaKnown RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 RPL22P35268 128 aaKnown RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 FDFT1P37268 417 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 NSG1P42857 185 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 CD151P48509 253 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 LMAN1P49257 510 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 CCZ1BP86790 482 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 RPA4Q13156 261 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 IL10RAQ13651 578 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 BRD3Q15059 726 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 SKIDA1Q1XH10 827 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 COLEC12Q5KU26 742 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 FAM69BQ5VUD6 431 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 ZNF517Q6ZMY9 492 aaPredicted RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 LINC00523Q86TU6 105 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 LDB1Q86U70 411 aaPredicted RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 VRK3Q8IV63 474 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 DNAAF3Q8N9W5 541 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 OR1L3Q8NH93 324 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 ELMO1Q92556 727 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 TFGQ92734 400 aaPredicted RBP14.65□□□□□ -0.06
UBXN4-203ENST00000416538 RANBP9Q96S59 729 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 TWSG1Q9GZX9 223 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 SRMSQ9H3Y6 488 aa14.65□□□□□ -0.06
UBXN4-203ENST00000416538 ACTL8Q9H568 366 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms