RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MYEOVQ96EZ4 313 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 NSMCE3Q96MG7 304 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ALPK1Q96QP1 1244 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 FUNDC2Q9BWH2 189 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ASIC5Q9NY37 505 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 TRIM17Q9Y577 477 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ILVBLA1L0T0 632 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 TMEM247A6NEH6 219 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 STX7O15400 261 aaKnown RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 RGS14O43566 566 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 CLDN11O75508 207 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 JRKO75564 520 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 F11P03951 625 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 IL6P05231 212 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 PCSK2P16519 638 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 PRKACGP22612 351 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 NFKBIAP25963 317 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 DGKQP52824 942 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 RAD23AP54725 363 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 PPP2R2BQ00005 443 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 NR6A1Q15406 480 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 C18orf21Q32NC0 220 aaPredicted RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 RFX4Q33E94 735 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 CTXN3Q4LDR2 81 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 ZRANB3Q5FWF4 1079 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 NIPAL1Q6NVV3 410 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 C17orf99Q6UX52 265 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 CERS6Q6ZMG9 384 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 TMEM179BQ7Z7N9 219 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 TMCO5AQ8N6Q1 288 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 ZNF548Q8NEK5 533 aaPredicted RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 KLHDC9Q8NEP7 349 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 ZFP90Q8TF47 636 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 TAMM41Q96BW9 452 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 C17orf80Q9BSJ5 609 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 KIAA1522Q9P206 1035 aaPredicted RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 ADGRE2Q9UHX3 823 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 AGO1Q9UL18 857 aaKnown RBP9.62□□□□□ -0.87
CD44-206ENST00000415148 PDE10AQ9Y233 779 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 CCL27Q9Y4X3 112 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 RAI2Q9Y5P3 530 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 CPQQ9Y646 472 aa9.62□□□□□ -0.87
CD44-206ENST00000415148 A0A0U1RQS6 177 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 A8MU76 341 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 H3BNC9 293 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RAD51BO15315 384 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 OR1I1O60431 355 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 WDR47O94967 919 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 GLUD1P00367 558 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 CST1P01037 141 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RETP07949 1114 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RYKP34925 604 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 HOXD12P35452 270 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 TGFBR1P36897 503 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RGRP47804 291 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 SLC11A2P49281 568 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 EIF2B2P49770 351 aaKnown RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 GP2P55259 537 aaKnown RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 LSM3P62310 102 aaKnown RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 FAM189BP81408 668 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 CACNG1Q06432 222 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 CYP4F3Q08477 520 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RFTN2Q52LD8 501 aaPredicted RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 ATG9BQ674R7 924 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 FRA10AC1Q70Z53 315 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 MILR1Q7Z6M3 343 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 DSG4Q86SJ6 1040 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ADHFE1Q8IWW8 467 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 CADM3Q8N126 398 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 TTC30BQ8N4P2 665 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ATAD1Q8NBU5 361 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 CHDHQ8NE62 594 aaPredicted RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 OR7D4Q8NG98 312 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 OR10Q1Q8NGQ4 319 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 SLC13A3Q8WWT9 602 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 GTF2H4Q92759 462 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 SH3YL1Q96HL8 342 aaPredicted RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 C19orf43Q9BQ61 176 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 HERC2P3Q9BVR0 1158 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RAD21L1Q9H4I0 556 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 POLE4Q9NR33 117 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 VAPAQ9P0L0 249 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 C3orf18Q9UK00 162 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 PCDHGB1Q9Y5G3 927 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ZFP37Q9Y6Q3 630 aaPredicted RBP9.61□□□□□ -0.87
CD44-206ENST00000415148 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 ELOVL7A1L3X0 281 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 SLC16A6O15403 523 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 B4GALT3O60512 393 aa9.61□□□□□ -0.87
CD44-206ENST00000415148 TLR5O60602 858 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1390.5 ms