RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 OOSP2Q86WS3 158 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 LKAAEAR1Q8TD35 194 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 PANX3Q96QZ0 392 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 DPH1Q9BZG8 443 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 TRIM31Q9BZY9 425 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 FOXJ2Q9P0K8 574 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 ASF1AQ9Y294 204 aa17.47■□□□□ 0.39
PDLIM2-206ENST00000409141 OR5K3A6NET4 321 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 KLK10O43240 276 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 USP1O94782 785 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 APOA4P06727 396 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 OGNP20774 298 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 ACADLP28330 430 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 FMO4P31512 558 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 PPP1CAP62136 330 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 MC2RQ01718 297 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 MORF4L2Q15014 288 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 TMED2Q15363 201 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 LONRF1Q17RB8 773 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 TYSND1Q2T9J0 566 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 COL28A1Q2UY09 1125 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 DCAF12Q5T6F0 453 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 CILP2Q8IUL8 1156 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 SPATA4Q8NEY3 305 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 LPGAT1Q92604 370 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 HGH1Q9BTY7 390 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 ASPSCR1Q9BZE9 553 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 SRMSQ9H3Y6 488 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 C20orf96Q9NUD7 363 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 CRYL1Q9Y2S2 319 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 PCDHGA3Q9Y5H0 932 aa17.46■□□□□ 0.39
PDLIM2-206ENST00000409141 EFCAB8A8MWE9 144 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 SMAPO00193 183 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 KPNA5O15131 536 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 GPC4O75487 556 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 PGAM1P18669 254 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 AOAHP28039 575 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 RAB15P59190 212 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 TLE3Q04726 772 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 PRKAA1Q13131 559 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 BBS9Q3SYG4 887 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 MSS51Q4VC12 460 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 DNTTIP2Q5QJE6 756 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 BROXQ5VW32 411 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 ZNF470Q6ECI4 717 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 HIBCHQ6NVY1 386 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 CENPUQ71F23 418 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 PRSS42Q7Z5A4 293 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 ZFAND4Q86XD8 727 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 SLC22A15Q8IZD6 547 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 PDIK1LQ8N165 341 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 BMPERQ8N8U9 685 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 OR52E1Q8NGJ3 308 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 OR5AR1Q8NGP9 310 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 PMEPA1Q969W9 287 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 SNF8Q96H20 258 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 BIRC8Q96P09 236 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 EBNA1BP2Q99848 306 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 DDA1Q9BW61 102 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 TRIT1Q9H3H1 467 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 ZNF768Q9H5H4 540 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 TFB2MQ9H5Q4 396 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 VPS9D1Q9Y2B5 631 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 B3GALT1Q9Y5Z6 326 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 FAM169AQ9Y6X4 670 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 AHCTF1Q8WYP5 2266 aa17.45■□□□□ 0.38
PDLIM2-206ENST00000409141 H3BMM5 538 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 BANF1O75531 89 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ESR1P03372 595 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 POLR2CP19387 275 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CD82P27701 267 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ITGA8P53708 1063 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 MRPS25P82663 173 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 FOXM1Q08050 763 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CTSL3PQ5NE16 218 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ANKS6Q68DC2 871 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 OTOAQ7RTW8 1153 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 VRK3Q8IV63 474 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 TBC1D21Q8IYX1 336 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 GSDMBQ8TAX9 411 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CALML6Q8TD86 181 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 KLHL6Q8WZ60 621 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 UBXN4Q92575 508 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 MAP3K3Q99759 626 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CTRCQ99895 268 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 XKR8Q9H6D3 395 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 INTS10Q9NVR2 710 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 POLG2Q9UHN1 485 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CDYLQ9Y232 598 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 TDRKHQ9Y2W6 561 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 POLR1CO15160 346 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 S1PR4O95977 384 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ADARP55265 1226 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ABRQ12979 859 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CLN3Q13286 438 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms