RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 SLC17A9Q9BYT1 436 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 TRIM54Q9BYV2 358 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 GBA3Q9H227 469 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 DHX35Q9H5Z1 703 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 LRRC40Q9H9A6 602 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SEPT11Q9NVA2 429 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PIH1D1Q9NWS0 290 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CWC15Q9P013 229 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 ANKMY1Q9P2S6 941 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CAPN6Q9Y6Q1 641 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 hCG_1818297A0A087WSY0 165 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 A0A087X0T9 212 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 A0A0J9YYE9 177 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MAGEB16A2A368 324 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 C3orf70A6NLC5 250 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 H3BMM5 538 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 AP3D1O14617 1153 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MID1O15344 667 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PALMO75781 387 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 NEBLO76041 1014 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 HEXIM1O94992 359 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CSPG5O95196 566 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PGM3O95394 542 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MOCS2O96007 188 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PEX11BO96011 259 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 TRBC1P01850 177 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 NTRK1P04629 796 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PROS1P07225 676 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 HMBSP08397 361 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 GSTA2P09210 222 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CSF1P09603 554 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 FAM228BP0C875 321 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MALP21145 153 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PSMD8P48556 350 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PGFP49763 221 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SMCPP49901 116 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PAPOLAP51003 745 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 STC1P52823 247 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SOX8P57073 446 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 AP1B1Q10567 949 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 ARHGEF7Q14155 803 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 RASA2Q15283 850 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 UGP2Q16851 508 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 BCL7AQ4VC05 210 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 FLYWCH1Q4VC44 716 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PPP6R3Q5H9R7 873 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 THEMIS2Q5TEJ8 643 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 KLHL35Q6PF15 583 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PACS1Q6VY07 963 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CERS6Q6ZMG9 384 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 CREG2Q8IUH2 290 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 APCDD1Q8J025 514 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MFSD4AQ8N468 514 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 AADATQ8N5Z0 425 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 DCBLD1Q8N8Z6 715 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 BBOF1Q8ND07 529 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 NMD3Q96D46 503 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 HMCESQ96FZ2 354 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 VMP1Q96GC9 406 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 HES6Q96HZ4 224 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 COX14Q96I36 57 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 MYCBPQ99417 103 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PRPF18Q99633 342 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 RAB11FIP5Q9BXF6 653 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 TDRD1Q9BXT4 1180 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 THAP2Q9H0W7 228 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SMURF2Q9HAU4 748 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 PRDM8Q9NQV8 689 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 AKAP7Q9P0M2 348 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SEMA5BQ9P283 1151 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 EIF2B4Q9UI10 523 aaKnown RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 RPS6KA6Q9UK32 745 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 SLC17A4Q9Y2C5 497 aa3.73□□□□□ -1.81
UBE3A-202ENST00000397954 COA3Q9Y2R0 106 aaPredicted RBP3.73□□□□□ -1.81
UBE3A-202ENST00000397954 LOC285095A0A1B0GVY8 99 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 LNP1A1A4G5 178 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 FAM229AH3BQW9 127 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 BTN3A1O00481 513 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 NUDT21O43809 227 aaKnown RBP3.72□□□□□ -1.81
UBE3A-202ENST00000397954 ERAL1O75616 437 aaKnown RBP3.72□□□□□ -1.81
UBE3A-202ENST00000397954 KRT38O76015 456 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 FSBPO95073 299 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 LDOC1O95751 146 aaPredicted RBP3.72□□□□□ -1.81
UBE3A-202ENST00000397954 CD160O95971 181 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 MT-ND3P03897 115 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 ITGA2BP08514 1039 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 ITGA5P08648 1049 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 FAM87AP0C7U9 286 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 CD59P13987 128 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 TPSB2P20231 275 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 RPL10P27635 214 aaKnown RBP3.72□□□□□ -1.81
UBE3A-202ENST00000397954 CDKN2BP42772 138 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 FASLGP48023 281 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 FNTAP49354 379 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 SGSHP51688 502 aa3.72□□□□□ -1.81
UBE3A-202ENST00000397954 CLNS1AP54105 237 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms