RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 MAGEE2Q8TD90 523 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TCRBV3S1A0A5B6 114 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MMP20O60882 483 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NOMO2Q5JPE7 1267 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TRMT1LQ7Z2T5 733 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LGALS12Q96DT0 336 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FICDQ9BVA6 458 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM39AQ9NV64 488 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GMPR2Q9P2T1 348 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LOC100130705A0A1B0GUX0 176 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 C9P02748 559 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF24P17028 368 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TWF1Q12792 350 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UGT2A3Q6UWM9 527 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CDYL2Q8N8U2 506 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FIZ1Q96SL8 496 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SPON1Q9HCB6 807 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ADAM29Q9UKF5 820 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SNX10Q9Y5X0 201 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MT-ND2P03891 347 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TCF3P15923 654 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LBHD1Q9BQE6 289 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 EURLQ9NYK6 297 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 KLHL21Q9UJP4 597 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 RGS5O15539 181 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ACTC1P68032 377 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ACTA1P68133 377 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MBTD1Q05BQ5 628 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ECM1Q16610 540 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 AP5B1Q2VPB7 878 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PLCZ1Q86YW0 608 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TRNT1Q96Q11 434 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SNRNP25Q9BV90 132 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CD93Q9NPY3 652 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UCKL1Q9NWZ5 548 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 A0A0G2JLL6 359 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TSPAN19P0C672 248 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CSHL1Q14406 222 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PPM1LQ5SGD2 360 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FBXL19Q6PCT2 694 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PRRT2Q7Z6L0 340 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UTP15Q8TED0 518 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLC13A3Q8WWT9 602 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 COQ6Q9Y2Z9 468 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TUBAL3A6NHL2 446 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ASPAP45381 313 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 REEP3Q6NUK4 255 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 KBTBD2Q8IY47 623 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 KBTBD7Q8WVZ9 684 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 BTBD1Q9H0C5 482 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MTHFD2LQ9H903 347 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZFYVE1Q9HBF4 777 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FBXO8Q9NRD0 319 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SAMHD1Q9Y3Z3 626 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 OAFQ86UD1 273 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ADAMTS18Q8TE60 1221 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PYDC1Q8WXC3 89 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 RAD51AP1Q96B01 352 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NAALAD2Q9Y3Q0 740 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 RPS3P23396 243 aaKnown RBP eCLIP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LCN1P31025 176 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GNG2P59768 71 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PCDH1Q08174 1060 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 THOC6Q86W42 341 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ADAM32Q8TC27 787 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TWNKQ96RR1 684 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLIT2O94813 1529 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GNG14A0A1W2PPG7 69 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PPP1R11O60927 126 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FABP3P05413 133 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF404Q494X3 552 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLC8B1Q6J4K2 584 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TTC29Q8NA56 475 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZBED2Q9BTP6 218 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ITPAQ9BY32 194 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TRIM2Q9C040 744 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TRIT1Q9H3H1 467 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NPFFR2Q9Y5X5 522 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LYVE1Q9Y5Y7 322 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PTGES3LE9PB15 166 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 RPIAP49247 311 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NDUFV1P49821 464 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MGAT5BQ3V5L5 792 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZCCHC12Q6PEW1 402 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NSMCE3Q96MG7 304 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HYKKA2RU49 373 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR5K4A6NMS3 321 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 BTN3A1O00481 513 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MYL12BO14950 172 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OVGP1Q12889 678 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 DUOXA1Q1HG43 343 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 RETREG3Q86VR2 466 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 POM121Q96HA1 1249 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SH3BP1Q9Y3L3 701 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NPIPB8E9PQR5 432 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CDC20Q12834 499 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC81Q6ZN84 652 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SPAG16Q8N0X2 631 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms