RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 DCAF12Q5T6F0 453 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 BROXQ5VW32 411 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 KIAA0930Q6ICG6 404 aaPredicted RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 NEPROQ6NW34 567 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 HOOK3Q86VS8 718 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 LRRC6Q86X45 466 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 KLHL7Q8IXQ5 586 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 BMPERQ8N8U9 685 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ACVR1CQ8NER5 493 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 OR4E2Q8NGC2 313 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 KLHL6Q8WZ60 621 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ART4Q93070 314 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 RMDN2Q96LZ7 410 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 FCRL3Q96P31 734 aaPredicted RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 TEFMQ96QE5 360 aaKnown RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 P2RY12Q9H244 342 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 TFB2MQ9H5Q4 396 aaKnown RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 SEMA5BQ9P283 1151 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ASIC3Q9UHC3 531 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 POLG2Q9UHN1 485 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 RPS6KL1Q9Y6S9 549 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ZCWPW2A0A1B0GU75 182 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 OR6C74A6NCV1 312 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 OR5K3A6NET4 321 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 IQCF5A8MTL0 148 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 GOLGA8KD6RF30 607 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 GOLGA8TH3BQL2 631 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 KPNA5O15131 536 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 POLR1CO15160 346 aaPredicted RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 FANCGO15287 622 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 KIF1CO43896 1103 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 PRAMEF10O60809 474 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 GPC4O75487 556 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 RASSF9O75901 435 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 USP1O94782 785 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 RPS3P23396 243 aaKnown RBP eCLIP9.59□□□□□ -0.87
CD48-202ENST00000368046 AOAHP28039 575 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PREPP48147 710 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 LEPRP48357 1165 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 UCNP55089 124 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 ADARP55265 1226 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 TLE3Q04726 772 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 HSPA14Q0VDF9 509 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 BOP1Q14137 746 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 DHX34Q14147 1143 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 CACHD1Q5VU97 1274 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PTRHD1Q6GMV3 140 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 ARMC6Q6NXE6 501 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 IRGCQ6NXR0 463 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 DUS1LQ6P1R4 473 aaKnown RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 NAPRTQ6XQN6 538 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 FAM92BQ6ZTR7 304 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PRSS42Q7Z5A4 293 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 OOSP2Q86WS3 158 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 FAM129CQ86XR2 697 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 LMNTD2Q8IXW0 634 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 TBC1D21Q8IYX1 336 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 LCN9Q8WX39 176 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 JPH3Q8WXH2 748 aaPredicted RBP9.59□□□□□ -0.87
CD48-202ENST00000368046 UBXN4Q92575 508 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PANX3Q96QZ0 392 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 CD180Q99467 661 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 ZPBPQ9BS86 351 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 DDA1Q9BW61 102 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 SPRY4Q9C004 299 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 SRMSQ9H3Y6 488 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 ASF1AQ9Y294 204 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 PCDHB11Q9Y5F2 797 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 B3GALT1Q9Y5Z6 326 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 MAD1L1Q9Y6D9 718 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 FAM169AQ9Y6X4 670 aa9.59□□□□□ -0.87
CD48-202ENST00000368046 ANKRD11Q6UB99 2663 aaPredicted RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 IGHV5-51A0A0C4DH38 117 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 UBA6A0AVT1 1052 aaPredicted RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 H3BMM5 538 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 MATN2O00339 956 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 SLCO2B1O94956 709 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 S1PR4O95977 384 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 APOA4P06727 396 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 LIPCP11150 499 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 ITGB6P18564 788 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 NELFEP18615 380 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 POLR2CP19387 275 aaPredicted RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 OGNP20774 298 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 FMO4P31512 558 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 SEPHS1P49903 392 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 PRKAA1Q13131 559 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 PRKG2Q13237 762 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CLN3Q13286 438 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 THOC5Q13769 683 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 IL11RAQ14626 422 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 LONRF1Q17RB8 773 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 TYSND1Q2T9J0 566 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 SYTL3Q4VX76 610 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 RNF187Q5TA31 235 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms