RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ECM1Q16610 540 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 NIPA1Q7RTP0 329 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 SYNPOQ8N3V7 929 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 ZUFSPQ96AP4 578 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 FAM129BQ96TA1 746 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 PRDM12Q9H4Q4 367 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 LRFN2Q9ULH4 789 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
VPS13B-203ENST00000358544 STMND1H3BQB6 276 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 FGF3P11487 239 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PTGES3Q15185 160 aaKnown RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 LRRN1Q6UXK5 716 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 USP45Q70EL2 814 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DNAJB7Q7Z6W7 309 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 C14orf80Q86SX3 495 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 VRTNQ9H8Y1 702 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 RCOR3Q9P2K3 495 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PRKAB1Q9Y478 270 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ISM1B1AKI9 464 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 HNMTP50135 292 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PPP5CP53041 499 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MTPNP58546 118 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CDC42EP1Q00587 391 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CLPPQ16740 277 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 EIF2S3LQ2VIR3 472 aaKnown RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TRIM40Q6P9F5 258 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF615Q8N8J6 731 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MAFIPQ8WZ33 124 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 RFT1Q96AA3 541 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 LPIN3Q9BQK8 851 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ACTR3BQ9P1U1 418 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CNTN6Q9UQ52 1028 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 N6AMT1Q9Y5N5 214 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ARAP3Q8WWN8 1544 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC19A2O60779 497 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC6A2P23975 617 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SPCS2Q15005 226 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 UGT8Q16880 541 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PIK3R6Q5UE93 754 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 NOTUMQ6P988 496 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TFAP2DQ7Z6R9 452 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CEP76Q8TAP6 659 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SLC2A14Q8TDB8 520 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TMEM203Q969S6 136 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZSWIM3Q96MP5 696 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CENPOQ9BU64 300 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SEMA3GQ9NS98 782 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 UPB1Q9UBR1 384 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 RIMKLBQ9ULI2 386 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MYPNQ86TC9 1320 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CXorf49A8MYA2 514 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 F5H5T6 163 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 RFXANKO14593 260 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MID1O15344 667 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ENTPD6O75354 484 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SMIM18P0DKX4 95 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PVALBP20472 110 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DNAJB1P25685 340 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DCKP27707 260 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 CEBPGP53567 150 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GRM3Q14832 879 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 DSG4Q86SJ6 1040 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PMEPA1Q969W9 287 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 HYLS1Q96M11 299 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TDRD3Q9H7E2 651 aaKnown RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 HCN2Q9UL51 889 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SH3BGRLO75368 114 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PSMD10O75832 226 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TGM6O95932 706 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PBLDP30039 288 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GMPSP49915 693 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PCDH1Q08174 1060 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PYHIN1Q6K0P9 492 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GPR156Q8NFN8 814 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 LRRC58Q96CX6 371 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SH3YL1Q96HL8 342 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZFP3Q96NJ6 502 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 GFOD1Q9NXC2 390 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MEMO1Q9Y316 297 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PRMT2P55345 433 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 HEPACAMQ14CZ8 416 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF614Q8N883 585 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF512Q96ME7 567 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 HSD17B14Q9BPX1 270 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 WACQ9BTA9 647 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ASB7Q9H672 318 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 COL20A1Q9P218 1284 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 VILLO15195 856 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 RAB2AP61019 212 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF177Q13360 481 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MARC1Q5VT66 337 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 OR2T5Q6IEZ7 315 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 VWA5B2Q8N398 1253 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 SIMC1Q8NDZ2 872 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 OR2T29Q8NH02 315 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 PPCDCQ96CD2 204 aa5.98□□□□□ -1.45
VPS13B-203ENST00000358544 MAGEB10Q96LZ2 347 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-203ENST00000358544 TAAR1Q96RJ0 339 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms