RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 PLEKHA8Q96JA3 519 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 DGCR6LQ9BY27 220 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 C8orf4Q9NR00 106 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 NUDT4Q9NZJ9 180 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 INVSQ9Y283 1065 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 SLC30A1Q9Y6M5 507 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 PLXNA3P51805 1871 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 ILVBLA1L0T0 632 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 MANSC4A6NHS7 340 aaPredicted RBP17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 AREL1O15033 823 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 CLDN11O75508 207 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 CPNE6O95741 557 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 NPPAP01160 153 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 ALDH2P05091 517 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 CCNA2P20248 432 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 C21orf59P57076 290 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 PHC1P78364 1004 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 MAPKAPK3Q16644 382 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 FUT10Q6P4F1 479 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 NCEH1Q6PIU2 408 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 SPARTQ8N0X7 666 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 SLC15A4Q8N697 577 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF548Q8NEK5 533 aaPredicted RBP17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 FAIMQ9NVQ4 179 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 FBXO10Q9UK96 956 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 VPS9D1Q9Y2B5 631 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 DGKBQ9Y6T7 804 aa17.76■□□□□ 0.43
PTP4A3-202ENST00000349124 C2orf78A6NCI8 922 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF840PA6NDX5 716 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 GNGT2O14610 69 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 SLC25A14O95258 325 aaPredicted RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 PRKAR2AP13861 404 aaKnown RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 CYP4F3Q08477 520 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 ILF2Q12905 390 aaKnown RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 KCNAB2Q13303 367 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 DPY19L1Q2PZI1 675 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 ANKRD46Q86W74 232 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 GFM2Q969S9 779 aaKnown RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 PKP3Q9Y446 797 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 GAPDHSO14556 408 aaPredicted RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 TULP3O75386 442 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 SEC22BO75396 215 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 TTKP33981 857 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 CCR3P51677 355 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 PLA2G16P53816 162 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF829Q3KNS6 432 aaPredicted RBP17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 RGL4Q8IZJ4 473 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 CARNMT1Q8N4J0 409 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.75■□□□□ 0.439e-8■□□□□ 10.7
PTP4A3-202ENST00000349124 ACTR8Q9H981 624 aa17.75■□□□□ 0.43
PTP4A3-202ENST00000349124 C1orf232A0A0U1RR37 186 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 TBC1D4O60343 1298 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 SEC14L2O76054 403 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 OTCP00480 354 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 PFKLP17858 780 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 JAK1P23458 1154 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 CD47Q08722 323 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 GRSF1Q12849 480 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 BROXQ5VW32 411 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 PIWIL3Q7Z3Z3 882 aaKnown RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF554Q86TJ5 538 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 C8orf59Q8N0T1 100 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 CHDHQ8NE62 594 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 RHBDF1Q96CC6 855 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 SLC47A1Q96FL8 570 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 YTHDF1Q9BYJ9 559 aaKnown RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 TRIM64BA6NI03 449 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 PFDN6O15212 129 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 GMNNO75496 209 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 PRAMEF1O95521 474 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 PGRP06401 933 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 KPNA1P52294 538 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 TPD52P55327 224 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 C6orf141Q5SZD1 244 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 GTF2IRD2BQ6EKJ0 949 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 GALNT18Q6P9A2 607 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 GTF2IRD2Q86UP8 949 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 WFDC5Q8TCV5 224 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 NETO1Q8TDF5 533 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 LZICQ8WZA0 190 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 FAM162AQ96A26 154 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 BARD1Q99728 777 aaKnown RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 OSBPL10Q9BXB5 764 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 DPY30Q9C005 99 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 ARMC7Q9H6L4 198 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 WARS2Q9UGM6 360 aaKnown RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF490Q9ULM2 529 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 ANGPTL3Q9Y5C1 460 aa17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 NUP214P35658 2090 aaPredicted RBP17.74■□□□□ 0.43
PTP4A3-202ENST00000349124 HS6ST1O60243 411 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 MITFO75030 526 aaPredicted RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 MYCLP1P12525 358 aaPredicted RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CACNG1Q06432 222 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms