RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CCDC137Q6PK04 289 aaKnown RBP15.64■□□□□ 0.09
ATG4B-201ENST00000344376 PPP1R3BQ86XI6 285 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 MPP5Q8N3R9 675 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 ESX1Q8N693 406 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 OTUD6BQ8N6M0 293 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 ACTRT1Q8TDG2 376 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 MAP3K3Q99759 626 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 HGH1Q9BTY7 390 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 TFB2MQ9H5Q4 396 aaKnown RBP15.64■□□□□ 0.09
ATG4B-201ENST00000344376 TREX1Q9NSU2 369 aa15.64■□□□□ 0.09
ATG4B-201ENST00000344376 GSAPA4D1B5 854 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 CES2O00748 559 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 PFDN6O15212 129 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 CD3EAPO15446 510 aaKnown RBP15.63■□□□□ 0.09
ATG4B-201ENST00000344376 KDM1AO60341 852 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 ZBTB11O95625 1053 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-201ENST00000344376 POLR2CP19387 275 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-201ENST00000344376 MAGEA6P43360 314 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 HSD11B2P80365 405 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 TUBB3Q13509 450 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 MAP7Q14244 749 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 KCNJ11Q14654 390 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 BRD3Q15059 726 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.63■□□□□ 0.09
ATG4B-201ENST00000344376 TMTC4Q5T4D3 741 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 COG1Q8WTW3 980 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 ELMO2Q96JJ3 720 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 KIFC1Q9BW19 673 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 GPN2Q9H9Y4 310 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-201ENST00000344376 SYBUQ9NX95 663 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 SAMD15Q9P1V8 674 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 RARRES3Q9UL19 164 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 SNX12Q9UMY4 172 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 ASF1AQ9Y294 204 aa15.63■□□□□ 0.09
ATG4B-201ENST00000344376 PRMT5O14744 637 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 MAP3K7O43318 606 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PHF2O75151 1096 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 DLGAP3O95886 979 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 FGF5P12034 268 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 LIFP15018 202 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PAMP19021 973 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 NMBRP28336 390 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ARCN1P48444 511 aaKnown RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 FNTAP49354 379 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ABHD18Q0P651 414 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SEMA3AQ14563 771 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 TMED2Q15363 201 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 MRNIPQ6NTE8 343 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SDCCAG8Q86SQ7 713 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 BPHLQ86WA6 291 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 AMIGO1Q86WK6 493 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PHC3Q8NDX5 983 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 OR52E1Q8NGJ3 308 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 TTC9Q92623 222 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 STAMBPL1Q96FJ0 436 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SPRY4Q9C004 299 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 XAB2Q9HCS7 855 aaKnown RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 RRAGDQ9NQL2 400 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SOHLH2Q9NX45 425 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 POLG2Q9UHN1 485 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 GNPTGQ9UJJ9 305 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 POMT2Q9UKY4 750 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SOX13Q9UN79 622 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 TCRBV7S3A2A0A539 114 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 SLC5A10A0PJK1 596 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 NDUFS3O75489 264 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ITGB2P05107 769 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 APOA4P06727 396 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ITGB6P18564 788 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 CDH3P22223 829 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 KPNA2P52292 529 aaKnown RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PRKG2Q13237 762 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PTRHD1Q6GMV3 140 aaKnown RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 CASC4Q6P4E1 433 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 C6orf15Q6UXA7 325 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 LRRC6Q86X45 466 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 TBC1D21Q8IYX1 336 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ASZ1Q8WWH4 475 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 PANX3Q96QZ0 392 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 CARD6Q9BX69 1037 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 FANCEQ9HB96 536 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 C1GALT1Q9NS00 363 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 MARCH4Q9P2E8 410 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-201ENST00000344376 LNPEPQ9UIQ6 1025 aa15.62■□□□□ 0.09
ATG4B-201ENST00000344376 ZNF891A8MT65 544 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-201ENST00000344376 C2orf74A8MZ97 194 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 SPAG6O75602 509 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 KIAA0754O94854 1291 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 VAPBO95292 243 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 MT-ND3P03897 115 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 RPN2P04844 631 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 EBLN1P0CF75 366 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 MLNP12872 115 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 FOLR1P15328 257 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 TCP1P17987 556 aaKnown RBP15.61■□□□□ 0.09
ATG4B-201ENST00000344376 SHMT2P34897 504 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 CSE1LP55060 971 aaKnown RBP15.61■□□□□ 0.09
ATG4B-201ENST00000344376 HSPA14Q0VDF9 509 aa15.61■□□□□ 0.09
ATG4B-201ENST00000344376 KCNAB1Q14722 419 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms