RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 KIF5CO60282 957 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 ZBTB11O95625 1053 aaPredicted RBP25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 POLR2CP19387 275 aaPredicted RBP25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 TTPAP49638 278 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 GPS1Q13098 491 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 TUBB3Q13509 450 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 TRIP13Q15645 432 aaPredicted RBP25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 TTC27Q6P3X3 843 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 TIPARPQ7Z3E1 657 aaKnown RBP25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 ELMO2Q96JJ3 720 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 AP1M1Q9BXS5 423 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 MRM3Q9HC36 420 aaKnown RBP25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 RARRES3Q9UL19 164 aa25.71■■□□□ 1.71
CDKN2A-201ENST00000304494 CD3EAPO15446 510 aaKnown RBP25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 KRT14P02533 472 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 KPNA2P52292 529 aaKnown RBP25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 C19orf57Q0VDD7 668 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 BRD3Q15059 726 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 ARMC3Q5W041 872 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC35F6Q8N357 371 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 MPP5Q8N3R9 675 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 OR52E1Q8NGJ3 308 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 FCRL4Q96PJ5 515 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 HGH1Q9BTY7 390 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 KIFC1Q9BW19 673 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 POMT2Q9UKY4 750 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 ASF1AQ9Y294 204 aa25.7■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC5A10A0PJK1 596 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 GSAPA4D1B5 854 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 SPAG6O75602 509 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 PRB1P04280 392 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 FOLR1P15328 257 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 MGAT1P26572 445 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 MAGEA6P43360 314 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 ARCN1P48444 511 aaKnown RBP25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 VPS41P49754 854 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 SEMA3AQ14563 771 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 KCNJ11Q14654 390 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 KCNAB1Q14722 419 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 CYP1B1Q16678 543 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 TMTC4Q5T4D3 741 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 C6orf15Q6UXA7 325 aaPredicted RBP25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 AMIGO1Q86WK6 493 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 D2HGDHQ8N465 521 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 ACTRT1Q8TDG2 376 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 STAMBPL1Q96FJ0 436 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC45A3Q96JT2 553 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 OSBPL9Q96SU4 736 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 ARHGAP9Q9BRR9 750 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 SLC12A9Q9BXP2 914 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 KCNF1Q9H3M0 494 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 C1GALT1Q9NS00 363 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 SYBUQ9NX95 663 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 POLG2Q9UHN1 485 aa25.69■■□□□ 1.7
CDKN2A-201ENST00000304494 GOLGA6L10A0A0M3HER8 536 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 LOC101059948A0A1B0GTJ6 334 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 TCRBV7S3A2A0A539 114 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 ZNF891A8MT65 544 aaPredicted RBP25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 CES2O00748 559 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 KIAA0754O94854 1291 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 MT-ND3P03897 115 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 EBLN1P0CF75 366 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 ZNF28P17035 718 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 CDH3P22223 829 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 ACADLP28330 430 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 NMBRP28336 390 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 COILP38432 576 aaPredicted RBP25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 STAT5AP42229 794 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 PRKG2Q13237 762 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 CCDC137Q6PK04 289 aaKnown RBP25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 TBC1D21Q8IYX1 336 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 CARD6Q9BX69 1037 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 FGF21Q9NSA1 209 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 SOHLH2Q9NX45 425 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 MARCH4Q9P2E8 410 aaPredicted RBP25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 LNPEPQ9UIQ6 1025 aa25.68■■□□□ 1.7
CDKN2A-201ENST00000304494 C2orf74A8MZ97 194 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 BTN3A1O00481 513 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 PRMT5O14744 637 aaPredicted RBP25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 KDM1AO60341 852 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 SHMT2P34897 504 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 TUBB4BP68371 445 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 CYP4F2P78329 520 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 TUBB2AQ13885 445 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 NAPRTQ6XQN6 538 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 GALNT6Q8NCL4 622 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 OR5AR1Q8NGP9 310 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 OR8K5Q8NH50 307 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 GRK7Q8WTQ7 553 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 ASZ1Q8WWH4 475 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 TUBB2BQ9BVA1 445 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 TRMT1Q9NXH9 659 aaKnown RBP25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 SNX12Q9UMY4 172 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 SOX13Q9UN79 622 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 BTRCQ9Y297 605 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 RPS6KL1Q9Y6S9 549 aa25.67■■□□□ 1.7
CDKN2A-201ENST00000304494 BHMG1C9JSJ3 638 aaPredicted RBP25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 BTN3A3O00478 584 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 MAP3K7O43318 606 aa25.66■■□□□ 1.7
CDKN2A-201ENST00000304494 C1QL1O75973 258 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms