RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SPATA19Q7Z5L4 167 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 SMRP1Q8NCR6 262 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 ELMO1Q92556 727 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ACOX2Q99424 681 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 EGFL8Q99944 293 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 TMEM79Q9BSE2 394 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 RPP25Q9BUL9 199 aaKnown RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 AKTIPQ9H8T0 292 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 FAM86C1Q9NVL1 165 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 UTP6Q9NYH9 597 aaKnown RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 WWOXQ9NZC7 414 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 OPTCQ9UBM4 332 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ZNF225Q9UK10 706 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ZFHX2Q9C0A1 2572 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 K7EQS6 105 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 OR7A17O14581 309 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 MBTPS2O43462 519 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 MMP20O60882 483 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 WDR47O94967 919 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 MATN4O95460 622 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 LMNAP02545 664 aaKnown RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 C7P10643 843 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 LBPP18428 481 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 KIR2DL1P43626 348 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 GPR1P46091 355 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 RPIAP49247 311 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 FOXA1P55317 472 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 PLOD1Q02809 727 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 HSPA14Q0VDF9 509 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 TRAF3Q13114 568 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 CST6Q15828 149 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 GSTA3Q16772 222 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 ZNF658BQ4V348 819 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 ZNF776Q68DI1 518 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 C16orf89Q6UX73 402 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 NET1Q7Z628 596 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 SNX32Q86XE0 403 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 SCUBE1Q8IWY4 988 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 KLHDC8AQ8IYD2 350 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 FBXL6Q8N531 539 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 POU5F2Q8N7G0 328 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 ZNF513Q8N8E2 541 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 FBXO27Q8NI29 283 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 MCOLN3Q8TDD5 553 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 NAT14Q8WUY8 206 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 FAM131CQ96AQ9 280 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 LINC00615Q96LM1 132 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 MAGEB10Q96LZ2 347 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 C3orf30Q96M34 536 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 GABRG3Q99928 467 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 NTMT1Q9BV86 223 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 TUBB1Q9H4B7 451 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 NOL11Q9H8H0 719 aaKnown RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 TRIM39Q9HCM9 518 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 RIC8BQ9NVN3 520 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 TRPS1Q9UHF7 1281 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 ASB1Q9Y576 335 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 ANGPTL3Q9Y5C1 460 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
TPM3-202ENST00000302206 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
TPM3-202ENST00000302206 CKAP5Q14008 2032 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 CACNA1HO95180 2353 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 C17orf113A0A1B0GUU1 675 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 PSMD12O00232 456 aaPredicted RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 LIN7AO14910 233 aaPredicted RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 SYNCRIPO60506 623 aaKnown RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 CCNT2O60583 730 aaKnown RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 MTX2O75431 263 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 KATNA1O75449 491 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 PSIP1O75475 530 aaKnown RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 STK16O75716 305 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 CIB2O75838 187 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 OR4F21O95013 312 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 ITGAXP20702 1163 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 CCND1P24385 295 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 NTSR1P30989 418 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 DRD3P35462 400 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 HSPA7P48741 367 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 CCNG1P51959 295 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 ERVPABLB-1P60509 514 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 STX1BP61266 288 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 STX5Q13190 355 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 CUL3Q13618 768 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 GTF2H3Q13889 308 aa11.74□□□□□ -0.53
TPM3-202ENST00000302206 BOP1Q14137 746 aaKnown RBP11.74□□□□□ -0.53
TPM3-202ENST00000302206 FASTKQ14296 549 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms