RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CNGB3Q9NQW8 809 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 RPS6KA6Q9UK32 745 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 A4GNTQ9UNA3 340 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 PLXNB2O15031 1838 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 PHIPQ8WWQ0 1821 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 LOC285556D6RIA3 1793 aa4.73□□□□□ -1.65
TRA2B-201ENST00000259043 MAPK8IP3Q9UPT6 1336 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 MUC6Q6W4X9 2439 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 A0A0G2JPF8 293 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 A0A1W2PRG0 241 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 AGAP14A8MT82 685 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HNRNPCL3B7ZW38 293 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 NTN3O00634 580 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-201ENST00000259043 LDLRAD4O15165 306 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 P4HA2O15460 535 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 SP1P08047 785 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 ZNF853P0CG23 659 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HNRNPCL4P0DMR1 293 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 RRM1P23921 792 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 ZNF132P52740 706 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 STK4Q13043 487 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-201ENST00000259043 LRRC26Q2I0M4 334 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 TCTN1Q2MV58 587 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HIST2H2BCQ6DN03 193 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HIST2H2BDQ6DRA6 164 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 TTI2Q6NXR4 508 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 FAM122CQ6P4D5 195 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 TICAM1Q8IUC6 712 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 ARHGAP12Q8IWW6 846 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 C17orf53Q8N3J3 647 aaPredicted RBP4.72□□□□□ -1.65
TRA2B-201ENST00000259043 WDTC1Q8N5D0 677 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 TMEM19Q96HH6 336 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 CMTM3Q96MX0 182 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 ZNF570Q96NI8 536 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 BBS4Q96RK4 519 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 SLF1Q9BQI6 1058 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 CENPOQ9BU64 300 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 STRA6Q9BX79 667 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 TKTL2Q9H0I9 626 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 C11orf49Q9H6J7 331 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 PCDH9Q9HC56 1237 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 FBRSL1Q9HCM7 1045 aaKnown RBP4.72□□□□□ -1.65
TRA2B-201ENST00000259043 HAO1Q9UJM8 370 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 MTMR6Q9Y217 621 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 ATAD5Q96QE3 1844 aa4.72□□□□□ -1.65
TRA2B-201ENST00000259043 RPAP1Q9BWH6 1393 aaPredicted RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 TMEM202A6NGA9 273 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 USP17L23D6RBM5 183 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PAGE4O60829 102 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 HOXB5P09067 269 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 G6PDP11413 515 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 RARGP13631 454 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 HLA-DOBP13765 273 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 MAOAP21397 527 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 TCEA1P23193 301 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 NNMTP40261 264 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PBX3P40426 434 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 GNAQP50148 359 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 FUT6P51993 359 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 SLC20A2Q08357 652 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 ACSM2AQ08AH3 577 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 NIPAL4Q0D2K0 466 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 CSTF3Q12996 717 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 EIF2S3LQ2VIR3 472 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 GPR139Q6DWJ6 353 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PLEKHA7Q6IQ23 1121 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 APOBEC3HQ6NTF7 200 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 CPLX2Q6PUV4 134 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PRPF39Q86UA1 669 aaKnown RBP4.71□□□□□ -1.66
TRA2B-201ENST00000259043 TDRPQ86YL5 185 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 ZBTB2Q8N680 514 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 KBTBD3Q8NAB2 608 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 CD101Q93033 1021 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PERPQ96FX8 193 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 TTC14Q96N46 770 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 MMP25Q9NPA2 562 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 KLHL1Q9NR64 748 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 DLGAP2Q9P1A6 1054 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 RCOR1Q9UKL0 485 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 PCDHGB4Q9UN71 923 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 FAM96BQ9Y3D0 163 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 ZNF711Q9Y462 761 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 REV3LO60673 3130 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 TRANK1O15050 2925 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 CACNA1FO60840 1977 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 CHD9Q3L8U1 2897 aa4.71□□□□□ -1.66
TRA2B-201ENST00000259043 BEST1O76090 585 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 IPO7O95373 1038 aaKnown RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 NR2F1P10589 423 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 MCM3P25205 808 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 GYG1P46976 350 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 RAD23BP54727 409 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
TRA2B-201ENST00000259043 BECN1Q14457 450 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 PSMD6Q15008 389 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 SLC30A6Q6NXT4 461 aa4.7□□□□□ -1.66
TRA2B-201ENST00000259043 LCTLQ6UWM7 567 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms