RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 LTB4R2Q9NPC1 389 aa18.13■□□□□ 0.49
LRP3-201ENST00000253193 GNPTGQ9UJJ9 305 aa18.13■□□□□ 0.49
LRP3-201ENST00000253193 SBF1O95248 1867 aa18.13■□□□□ 0.49
LRP3-201ENST00000253193 CPSF4O95639 269 aaKnown RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 KRT6AP02538 564 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 KRT6BP04259 564 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 CTGFP29279 349 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 KRT6CP48668 564 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 SUOXP51687 545 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 NEK2P51955 445 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 DSC1Q08554 894 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 ELAVL2Q12926 359 aaKnown RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 TTLL9Q3SXZ7 439 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 TSPEARQ8WU66 669 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 ASPDHA6ND91 283 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 ADAM12O43184 909 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 CLDN7O95471 211 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 PRLP01236 227 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 CKMP06732 381 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 LRRC73Q5JTD7 316 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 R3HCC1LQ7Z5L2 792 aaKnown RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 ZC3H7AQ8IWR0 971 aaKnown RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 RBFAQ8N0V3 343 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 TUBA8Q9NY65 449 aaPredicted RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 LOC730098B7Z3J9 87 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 H3BMQ9 156 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 EFNA1P20827 205 aaPredicted RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 HALP42357 657 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 COQ5Q5HYK3 327 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 Q6ZNX1 250 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 RAET1EQ8TD07 263 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 DUS3LQ96G46 650 aaKnown RBP18.12■□□□□ 0.49
LRP3-201ENST00000253193 NSMCE3Q96MG7 304 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 COG8Q96MW5 612 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 RUBCNLQ9H714 662 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 FAIMQ9NVQ4 179 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 MED16Q9Y2X0 877 aa18.12■□□□□ 0.49
LRP3-201ENST00000253193 EVPLLA8MZ36 301 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 CXCR6O00574 342 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 PRAMEF12O95522 483 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 FTH1P02794 183 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 OCM2P0CE71 109 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 OCMP0CE72 109 aaPredicted RBP18.11■□□□□ 0.49
LRP3-201ENST00000253193 HRH2P25021 359 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 ALDH3A2P51648 485 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 SLC44A4Q53GD3 710 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 GALNT18Q6P9A2 607 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 TMEM161AQ9NX61 479 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 C2orf78A6NCI8 922 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 TULP3O75386 442 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 KLKB1P03952 638 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 MAD2L1Q13257 205 aaPredicted RBP18.11■□□□□ 0.49
LRP3-201ENST00000253193 SULT1C3Q6IMI6 304 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 ADHFE1Q8IWW8 467 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.496e-8■■■■■ 29.7
LRP3-201ENST00000253193 DHRS7Q9Y394 339 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 M0R3G1 203 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 PGRP06401 933 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 SREBF2Q12772 1141 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 NR1D2Q14995 579 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 RETSATQ6NUM9 610 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 C8orf82Q6P1X6 216 aaPredicted RBP18.11■□□□□ 0.49
LRP3-201ENST00000253193 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
LRP3-201ENST00000253193 PNPT1Q8TCS8 783 aaKnown RBP18.11■□□□□ 0.49
LRP3-201ENST00000253193 TRIB3Q96RU7 358 aa18.11■□□□□ 0.49
LRP3-201ENST00000253193 A0A1W2PQ67 120 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 STC2O76061 302 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 SERPINA1P01009 418 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 RAD23AP54725 363 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 PHKG1Q16816 387 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ZNF621Q6ZSS3 439 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 FAM86B1Q8N7N1 296 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 LZICQ8WZA0 190 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 GLMNQ92990 594 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 TOR1BO14657 336 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 STK16O75716 305 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ATF6P18850 670 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 CSKP41240 450 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 SETMARQ53H47 684 aaPredicted RBP18.1■□□□□ 0.49
LRP3-201ENST00000253193 PYCR3Q53H96 274 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 TERB1Q8NA31 727 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 C8orf4Q9NR00 106 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 PCDHB3Q9Y5E6 796 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 PCDHB1Q9Y5F3 818 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 UPK3BL1B0FP48 263 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 UPK3BL2E5RIL1 263 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ACOX3O15254 700 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ANXA5P08758 320 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ALDH4A1P30038 563 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 POLR2IP36954 125 aaKnown RBP18.1■□□□□ 0.49
LRP3-201ENST00000253193 SPRED1Q7Z699 444 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 ZBTB2Q8N680 514 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 LEMD2Q8NC56 503 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 SGCDQ92629 289 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 APOLD1Q96LR9 279 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 PDFQ9HBH1 243 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 C3orf18Q9UK00 162 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 SH3GLB1Q9Y371 365 aa18.1■□□□□ 0.49
LRP3-201ENST00000253193 GLYATL1P3A0A0U1RQE8 302 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms