RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 H2AFJQ9BTM1 129 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 MECRQ9BV79 373 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 OR52A5Q9H2C5 316 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 PARVBQ9HBI1 364 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 CD274Q9NZQ7 290 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 OARD1Q9Y530 152 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 PCDHGA2Q9Y5H1 932 aa18.77■□□□□ 0.6
SBDS-201ENST00000246868 A0A1B0GTW7 788 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 GFYI3L273 518 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 UBXN8O00124 270 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 SCAMP1O15126 338 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 CTSEP14091 401 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 KCNC1P48547 511 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 NUBP1P53384 320 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 PRKAA2P54646 552 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 CTBSQ01459 385 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 TGFBIQ15582 683 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 LAYNQ6UX15 382 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 RAB44Q7Z6P3 723 aaPredicted RBP18.76■□□□□ 0.59
SBDS-201ENST00000246868 PHACTR4Q8IZ21 702 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 ZC3H10Q96K80 434 aaKnown RBP18.76■□□□□ 0.59
SBDS-201ENST00000246868 SLC12A9Q9BXP2 914 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 TMEM168Q9H0V1 697 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 RDH14Q9HBH5 336 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 OXSMQ9NWU1 459 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 DNAJC28Q9NX36 388 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 UTP6Q9NYH9 597 aaKnown RBP18.76■□□□□ 0.59
SBDS-201ENST00000246868 NUDT4Q9NZJ9 180 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 ADAMTS6Q9UKP5 1117 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 PLEKHM1Q9Y4G2 1056 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 LRP4O75096 1905 aa18.76■□□□□ 0.59
SBDS-201ENST00000246868 PDZK1P1A8MUH7 402 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 DLX3O60479 287 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 TRIM13O60858 407 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 H2AFYO75367 372 aaKnown RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 IPO13O94829 963 aaKnown RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 RPN2P04844 631 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 DPP6P42658 865 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 CSNK1EP49674 416 aaKnown RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 CLCNKAP51800 687 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 GNGT1P63211 74 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 SIM2Q14190 667 aaPredicted RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 PPP1R3AQ16821 1122 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 LIPMQ5VYY2 423 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 UNC5DQ6UXZ4 953 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 FBXO39Q8N4B4 442 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 RAB3IL1Q8TBN0 382 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 GSDMCQ9BYG8 508 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 MANSC1Q9H8J5 431 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 SIRPGQ9P1W8 387 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 PNMA8BQ9ULN7 279 aaPredicted RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 PSMD13Q9UNM6 376 aa18.75■□□□□ 0.59
SBDS-201ENST00000246868 ZFC3H1O60293 1989 aaKnown RBP18.75■□□□□ 0.59
SBDS-201ENST00000246868 PRR33A8MZF0 331 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 FFAR2O15552 330 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PSIP1O75475 530 aaKnown RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 JUNDP17535 347 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 RPL10P27635 214 aaKnown RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 ACTR1BP42025 376 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 RPIAP49247 311 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 AP1S2P56377 157 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 NXPH1P58417 271 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ACTR1AP61163 376 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 NFKB2Q00653 900 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 CHI3L2Q15782 390 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PFKFB4Q16877 469 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ZNF542PQ5EBM4 170 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ATG16L1Q676U5 607 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 TTC23LQ6PF05 361 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 XKR5Q6UX68 686 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 MAGEC3Q8TD91 643 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PHF21BQ96EK2 531 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 EGFL8Q99944 293 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 WWP1Q9H0M0 922 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 CCDC134Q9H6E4 229 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ARL15Q9NXU5 204 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 APOBEC3BQ9UH17 382 aaKnown RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 KMT2EQ8IZD2 1858 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 NEMP2A6NFY4 417 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 NCF1BA6NI72 391 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 A8MT66 165 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 NCF1CA8MVU1 366 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 GALR2O43603 387 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 NCF1P14598 390 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 BGNP21810 368 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 GRK2P25098 689 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 ACADLP28330 430 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 HALP42357 657 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 DNAJB13P59910 316 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PHKG1Q16816 387 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 CDKL4Q5MAI5 379 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 SLC30A9Q6PML9 568 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 PTGR2Q8N8N7 351 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 TFGQ92734 400 aaPredicted RBP18.74■□□□□ 0.59
SBDS-201ENST00000246868 DLG3Q92796 817 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 NCKIPSDQ9NZQ3 722 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PDE10AQ9Y233 779 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms