RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 NOP16Q9Y3C1 178 aaKnown RBP13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 TRPV2Q9Y5S1 764 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 GRIN3BO60391 1043 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 PLATP00750 562 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 GSTM3P21266 225 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 SLC1A2P43004 574 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 SNRPD1P62314 119 aaKnown RBP13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 HSPA14Q0VDF9 509 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 CTBP1Q13363 440 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 SSX6Q7RTT6 188 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 SHC3Q92529 594 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 GTPBP3Q969Y2 492 aaKnown RBP13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 CPXM1Q96SM3 734 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 SSX3Q99909 188 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 PBDC1Q9BVG4 233 aa13.52□□□□□ -0.24
SIPA1L3-201ENST00000222345 DAPL1A0PJW8 107 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ZNF208O43345 1280 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ARL6IP5O75915 188 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 PGAM2P15259 253 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 XKP51811 444 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 MPPE1Q53F39 396 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ASB18Q6ZVZ8 466 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 TBC1D15Q8TC07 691 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 KANSL3Q9P2N6 904 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ZNF705EA8MWA4 302 aaPredicted RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CYB5AP00167 134 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 HLA-DPB1P04440 258 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ABCG1P45844 678 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 RARRES1P49788 294 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CDH12P55289 794 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 SRSF11Q05519 484 aaKnown RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 FAM183BPQ6ZVS7 135 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CMC1Q7Z7K0 106 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 PAQR5Q9NXK6 330 aaPredicted RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 PRMT2P55345 433 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ATP13A4Q4VNC1 1196 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 TMEM139Q8IV31 216 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ARL5BQ96KC2 179 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 EIF2B3Q9NR50 452 aaKnown RBP13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 A0A087X0B3 334 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 LRRN3E7EW58 273 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 LAMP2P13473 410 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 CD79BP40259 229 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 TDGQ13569 410 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ANKS1BQ7Z6G8 1248 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 HID1Q8IV36 788 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 ERLEC1Q96DZ1 483 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 WACQ9BTA9 647 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
SIPA1L3-201ENST00000222345 JCADQ9P266 1359 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 BORCS7-ASMTA0A0B4J1R7 106 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 COL6A1P12109 1028 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 HTR7P34969 479 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 ALDH3B2P48448 385 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 NKAPLQ5M9Q1 402 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 IL23RQ5VWK5 629 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 ZNF701M0R085 212 aaPredicted RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 KRT33AO76009 404 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 OXSR1O95747 527 aaPredicted RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 GADD45AP24522 165 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 UGT2B10P36537 528 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 NFIXQ14938 502 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 PNLDC1Q8NA58 520 aaKnown RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 SLC2A14Q8TDB8 520 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 SGK2Q9HBY8 427 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 PXMP2Q9NR77 195 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 TAS2R10Q9NYW0 307 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 COMMD7Q86VX2 200 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 DNERQ8NFT8 737 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 OR52J3Q8NH60 311 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 TMEM134Q9H6X4 195 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 SNCAIPQ9Y6H5 919 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 HMGN1P05114 100 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 HK1P19367 917 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 CLCN4P51793 760 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 RNASEH2BQ5TBB1 312 aaKnown RBP13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 HECTD2Q5U5R9 776 aa13.51□□□□□ -0.25
SIPA1L3-201ENST00000222345 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms