RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fam136aQ9CR98 138 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 SrpraQ9DBG7 636 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 D7h11orf16Q9JJR6 402 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pias4Q9JM05 507 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr625-ps1A0A140T8L4 321 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Syndig1A2ANU3 258 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Atp6ap1lD3Z5W0 336 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn2r103E9PWW0 856 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn2r111K7N674 857 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 NapsaO09043 419 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ccnb2P30276 398 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 OstnP61364 130 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Copz1P61924 177 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Serpina7P61939 418 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc30a1Q60738 503 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Itga3Q62470 1053 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem151bQ68FE7 561 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Snx6Q6P8X1 406 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nrde2Q80XC6 1172 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem198Q8BG75 360 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kansl2Q8BQR4 486 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Exd1Q8CDF7 570 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Galnt18Q8K1B9 622 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr570Q8VH12 312 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Bpifa3Q9D9J8 232 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ptges3Q9R0Q7 160 aaKnown RBP10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Creb3l1Q9Z125 519 aa10.15□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm21149A0A0G2JFY7 255 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm35911A0A1D5RLS7 214 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm6685D3YYP3 228 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm21319F6YNI8 144 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm3239L7N2D9 227 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fam71e2L7N480 754 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fv4P11370 679 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 CskP41241 450 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tead2P48301 445 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ddx6P54823 483 aaKnown RBP10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 F8a1Q00558 380 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ag2Q3UPL5 249 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Psg28Q4KL66 472 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Prkd1Q62101 918 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vwa2Q70UZ7 791 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr667Q7TRP4 326 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rpp38Q80UU2 280 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mup21Q80YX8 181 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm21627Q810R0 219 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Nphs2Q91X05 385 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cryl1Q99KP3 319 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 S100a14Q9D2Q8 104 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Il17rbQ9JIP3 499 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc5a3Q9JKZ2 718 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bace2Q9JL18 514 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ccr10Q9JL21 362 aa10.15□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm7145A0A087WS64 360 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc25a54B1AUS6 473 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r54K7N649 806 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cdc6O89033 562 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 DtymkP97930 212 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Smim24Q0VG18 120 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Actr3bQ641P0 418 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cd300lfQ6SJQ7 337 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Scn4bQ7M729 228 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pnma8aQ80VM8 430 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Nup107Q8BH74 926 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RergQ8R367 199 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr700Q8VFM5 316 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Dsn1Q9CYC5 348 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Kat2aQ9JHD2 830 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc7a8Q9QXW9 531 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cldn9Q9Z0S7 217 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm4756A0A140LIS8 335 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Enpp1P06802 906 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 MndaP0DOV1 425 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PnpP23492 289 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gjb3P28231 270 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Agtr2P35374 363 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Acsl1P41216 699 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Lrrn4P59383 733 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rps24P62849 133 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tuba1cP68373 449 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Angptl1Q640P2 490 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Prrg2Q8R182 198 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1310Q8VF85 312 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cmtm6Q9CZ69 183 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tuba8Q9JJZ2 449 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Smok1Q9QYZ4 484 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Khdrbs3Q9R226 346 aaKnown RBP10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mpp2Q9WV34 552 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Elf4Q9Z2U4 655 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Chil5A0A0G2JDS2 431 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fam155bA2BDP1 471 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Vmn2r86G5E8Y4 848 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm16427J3QN52 483 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 GnazO70443 355 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Trp53i11Q4QQM4 189 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm11992Q5SS90 291 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ppp1r15bQ8BFW3 697 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 GskipQ8BGR8 139 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Efemp1Q8BPB5 493 aa10.14□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zhx3Q8C0Q2 951 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms