RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SMYD1Q8NB12 490 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 SLC13A3Q8WWT9 602 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 SNX19Q92543 992 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 TSSK3Q96PN8 268 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 BRINP2Q9C0B6 783 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 MAGEH1Q9H213 219 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ASB8Q9H765 288 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZIM2Q9NZV7 527 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 DNMT3LQ9UJW3 386 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 A0A1W2PQ67 120 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 XPNPEP2O43895 674 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 TBC1D4O60343 1298 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PRAMEF1O95521 474 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF682O95780 498 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 OCM2P0CE71 109 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 OCMP0CE72 109 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 UMPSP11172 480 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 AKT1P31749 480 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ALDH3A2P51648 485 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NEK2P51955 445 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NFATC3Q12968 1075 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 SIM2Q14190 667 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NR1D2Q14995 579 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PGS1Q32NB8 556 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 BROXQ5VW32 411 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 THAP5Q7Z6K1 395 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PTRH1Q86Y79 214 aaKnown RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF555Q8NEP9 628 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 TBC1D15Q8TC07 691 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 LKAAEAR1Q8TD35 194 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 WBP2Q969T9 261 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NRBF2Q96F24 287 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 SLC47A1Q96FL8 570 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 OR52E6Q96RD3 313 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ACTR8Q9H981 624 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 CIDEBQ9UHD4 219 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 OR7A17O14581 309 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PRMT5O14744 637 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 LSM1O15116 133 aaKnown RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 NBNO60934 754 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PRR35P0CG20 571 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 CA5AP35218 305 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 HLCSP50747 726 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 IL5RAQ01344 420 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 CRY1Q16526 586 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF583Q96ND8 569 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 MYOCQ99972 504 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF490Q9ULM2 529 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-221ENST00000640341 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 PCDHB3Q9Y5E6 796 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 CORINQ9Y5Q5 1042 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 MYO16Q9Y6X6 1858 aa14.35□□□□□ -0.11
SCARB2-221ENST00000640341 ALDH2P05091 517 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 CYBAP13498 195 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 KCNAB2Q13303 367 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 PERM1Q5SV97 790 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SERPINA9Q86WD7 417 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 RASAL3Q86YV0 1011 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SLC15A4Q8N697 577 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 PYCR2Q96C36 320 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ZNF382Q96SR6 550 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ULK1O75385 1050 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 FTH1P02794 183 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ALPLP05186 524 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 CKBP12277 381 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 FSHRP23945 695 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ADARB1P78563 741 aaKnown RBP14.34□□□□□ -0.11
SCARB2-221ENST00000640341 PRKCZQ05513 592 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ACBD5Q5T8D3 534 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ANKRD26P1Q6NSI1 321 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 CNIH3Q8TBE1 160 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ACDQ96AP0 544 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SELENONQ9NZV5 590 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 EIF3LQ9Y262 564 aaKnown RBP14.34□□□□□ -0.11
SCARB2-221ENST00000640341 TDRD15B5MCY1 1934 aaKnown RBP14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SLC38A8A6NNN8 435 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
SCARB2-221ENST00000640341 ATF6P18850 670 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 CYP4F3Q08477 520 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 DSC1Q08554 894 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 COQ5Q5HYK3 327 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 CROCCP3Q8IVE0 287 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 TMCO5AQ8N6Q1 288 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 KCNJ9Q92806 393 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SLC6A13Q9NSD5 602 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 OPTCQ9UBM4 332 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 SNX5Q9Y5X3 404 aa14.34□□□□□ -0.11
SCARB2-221ENST00000640341 RAD51BO15315 384 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 SEPT4O43236 478 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 COCHO43405 550 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 MITFO75030 526 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-221ENST00000640341 ATP6V1G1O75348 118 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 OTCP00480 354 aa14.33□□□□□ -0.12
SCARB2-221ENST00000640341 OR1D2P34982 312 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms