RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MNTQ99583 582 aa18.24■□□□□ 0.51
SCARB2-213ENST00000638680 HNRNPABQ99729 332 aaKnown RBP18.24■□□□□ 0.51
SCARB2-213ENST00000638680 CD320Q9NPF0 282 aa18.24■□□□□ 0.51
SCARB2-213ENST00000638680 NECTIN3Q9NQS3 549 aa18.24■□□□□ 0.51
SCARB2-213ENST00000638680 FBXW11Q9UKB1 542 aa18.24■□□□□ 0.51
SCARB2-213ENST00000638680 OAZ3Q9UMX2 235 aa18.24■□□□□ 0.51
SCARB2-213ENST00000638680 RORCP51449 518 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 RFKQ969G6 155 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 OR52B2Q96RD2 323 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 PCDHGB3Q9Y5G1 929 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 MYPNQ86TC9 1320 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 AQP12BA6NM10 295 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 MAGEB3O15480 346 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 PSKH1P11801 424 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 OGNP20774 298 aaKnown RBP18.23■□□□□ 0.51
SCARB2-213ENST00000638680 YBEYP58557 167 aaPredicted RBP18.23■□□□□ 0.51
SCARB2-213ENST00000638680 RPS14P62263 151 aaKnown RBP18.23■□□□□ 0.51
SCARB2-213ENST00000638680 SMARCB1Q12824 385 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 AQP12AQ8IXF9 295 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TNFAIP8L1Q8WVP5 186 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 CANT1Q8WVQ1 401 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 HAVCR1Q96D42 359 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 PCED1BQ96HM7 432 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 LRRC3Q9BY71 257 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 SPATA31D3P0C874 917 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 ALDH3A2P51648 485 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 AP3S2P59780 193 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 FRRS1Q6ZNA5 592 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 SPATA31D4Q6ZUB0 917 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TRIM74Q86UV6 250 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TRIM73Q86UV7 250 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 UFD1Q92890 307 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 PSMG2Q969U7 264 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TAS2R7Q9NYW3 318 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 PRODHO43272 600 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 LAMP2P13473 410 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 MAPK12P53778 367 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 MAP2K5Q13163 448 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 SF1Q15637 639 aaKnown RBP18.23■□□□□ 0.51
SCARB2-213ENST00000638680 FAM46CQ5VWP2 391 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 NIPA2Q8N8Q9 360 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 MINDY2Q8NBR6 621 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TVP23BQ9NYZ1 205 aa18.23■□□□□ 0.51
SCARB2-213ENST00000638680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 NEMP2A6NFY4 417 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 TSPAN4O14817 238 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 ARPC2O15144 300 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SLC22A1O15245 554 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 PBX3P40426 434 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 CLCNKBP51801 687 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 NRLP54845 237 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 PDE12Q6L8Q7 609 aaKnown RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 POMZP3Q6PJE2 187 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 CADM2Q8N3J6 435 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 KCNN2Q9H2S1 579 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 KERAO60938 352 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 KRT33AO76009 404 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 NDST2P52849 883 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 IDNKQ5T6J7 187 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 FAM91A1Q658Y4 838 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SLC35B2Q8TB61 432 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SPPL2BQ8TCT7 592 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SLCO2A1Q92959 643 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 TTPALQ9BTX7 342 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 COL20A1Q9P218 1284 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 COMMD3Q9UBI1 195 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 ARL5AQ9Y689 179 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SLC7A4O43246 635 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 HTR1BP28222 390 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 GRIA1P42261 906 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 HERVK_113P63132 956 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 NOL9Q5SY16 702 aaKnown RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 ERVK-6Q9BXR3 956 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 A0A1W2PQ72 361 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 H3BNH8 94 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 GMFGO60234 142 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 CDK14O94921 469 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 LMO2P25791 158 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 CCL23P55773 120 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 SULT2A1Q06520 285 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 TEAD4Q15561 434 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 NPTX1Q15818 432 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 GLB1L3Q8NCI6 653 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 C8orf48Q96LL4 319 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 ZNF395Q9H8N7 513 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 CNTN3Q9P232 1028 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 GRIP1Q9Y3R0 1128 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 RBM7Q9Y580 266 aaKnown RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 KLRG2A4D1S0 409 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 STBD1O95210 358 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 ASGR1P07306 291 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 KIAA0930Q6ICG6 404 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-213ENST00000638680 RNF31Q96EP0 1072 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 PKP2Q99959 881 aa18.22■□□□□ 0.51
SCARB2-213ENST00000638680 PER2O15055 1255 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 PTX3P26022 381 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-213ENST00000638680 IL1R2P27930 398 aa18.21■□□□□ 0.51
SCARB2-213ENST00000638680 LAPTM5Q13571 262 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms