RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 NCEH1Q6PIU2 408 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PAOXQ6QHF9 649 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MIB1Q86YT6 1006 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 FCAMRQ8WWV6 532 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 OMDQ99983 421 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SPOCK3Q9BQ16 436 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 OSGEPL1Q9H4B0 414 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NANSQ9NR45 359 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 DFNA5O60443 496 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PTPAQ15257 358 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CUZD1Q86UP6 607 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 ARHGAP12Q8IWW6 846 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 Q8N402 240 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 C11orf65Q8NCR3 313 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MCCC1Q96RQ3 725 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SECISBP2Q96T21 854 aaKnown RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CEP152O94986 1710 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SCGB2A2Q13296 93 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 C3orf33Q6P1S2 294 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NOXA1Q86UR1 476 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SNX27Q96L92 541 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TIGARQ9NQ88 270 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PRMT7Q9NVM4 692 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PZPP20742 1482 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 FGFR1P11362 822 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 CAPN3P20807 821 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 FGFBP1Q14512 234 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 MIIPQ5JXC2 388 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF436Q9C0F3 470 aaPredicted RBP14.83□□□□□ -0.03
COL5A1-208ENST00000618395 TRIM36Q9NQ86 728 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 PCDHGB1Q9Y5G3 927 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF609O15014 1411 aa14.83□□□□□ -0.03
COL5A1-208ENST00000618395 GSG1L2A8MUP6 293 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 CTDNEP1O95476 244 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 ODC1P11926 461 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 CCR10P46092 362 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 TCEA2Q15560 299 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 POGLUT1Q8NBL1 392 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 AGAP2Q99490 1192 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 GBX2P52951 348 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 ZNF616Q08AN1 781 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 GPR153Q6NV75 609 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 IFNLR1Q8IU57 520 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 DNAAF1Q8NEP3 725 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 LRRC4CQ9HCJ2 640 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 YARS2Q9Y2Z4 477 aaKnown RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 COQ9O75208 318 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 IRF8Q02556 426 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 ZNF720Q7Z2F6 126 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 PIGXQ8TBF5 258 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 UPF1Q92900 1129 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 TAAR8Q969N4 342 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 SH2D3AQ9BRG2 576 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 COA1Q9GZY4 146 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 ATP7AQ04656 1500 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 NDUFB10O96000 172 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 MAPK3P27361 379 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 MAP2K3P46734 347 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 GK2Q14410 553 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 MMP19Q99542 508 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 MGAT4BQ9UQ53 548 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 CHD4Q14839 1912 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 LRRN3E7EW58 273 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 RGS8P57771 180 aaPredicted RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 MC1RQ01726 317 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 EBNA1BP2Q99848 306 aaKnown RBP14.83□□□□□ -0.04
COL5A1-208ENST00000618395 LRRN3Q9H3W5 708 aa14.83□□□□□ -0.04
COL5A1-208ENST00000618395 CYP27B1O15528 508 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 GNASQ5JWF2 1037 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 TAPT1Q6NXT6 567 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 KCTD9Q7L273 389 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 SCML4Q8N228 414 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 DPF1Q92782 380 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 SULT4A1Q9BR01 284 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 CCDC32Q9BV29 185 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 C14orf105Q9NVL8 296 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 GPATCH2LQ9NWQ4 482 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 IFT52Q9Y366 437 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 A0A1W2PPW3 197 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 GRID2O43424 1007 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 DAG1Q14118 895 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 BRINP3Q76B58 766 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 HSFY1Q96LI6 401 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 ENAMQ9NRM1 1142 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 CNTNAP2Q9UHC6 1331 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 A0A1W2PPM1 405 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 SCGB1D1O95968 90 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 PSMB4P28070 264 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 POU4F2Q12837 409 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 OR5T2Q8NGG2 359 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 DCDC2CA8MYV0 355 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 RFPL3O75679 317 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 AHSA1O95433 338 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 STT3AP46977 705 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 ATXN7L3Q14CW9 347 aaPredicted RBP14.82□□□□□ -0.04
COL5A1-208ENST00000618395 LRRC37A5PQ49AS3 106 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 SNX29P2Q8IUI4 249 aa14.82□□□□□ -0.04
COL5A1-208ENST00000618395 LZTR1Q8N653 840 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms