RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 PDZD3Q86UT5 571 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 PPIL6Q8IXY8 311 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 BMPERQ8N8U9 685 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 ELMO1Q92556 727 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 TAAR9Q96RI9 348 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 OCIAD1Q9NX40 245 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 FOXJ2Q9P0K8 574 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 KLHL3Q9UH77 587 aa23.62■■□□□ 1.37
UBE2E3-213ENST00000602959 IFRD1O00458 451 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 CD82P27701 267 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 PTGIRP43119 386 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 LEPRP48357 1165 aaKnown RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 PLOD1Q02809 727 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 TMEM164Q5U3C3 297 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 CES3Q6UWW8 571 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 PRSS42Q7Z5A4 293 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 LDB1Q86U70 411 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 JPH3Q8WXH2 748 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 ZDHHC12Q96GR4 267 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 NAF1Q96HR8 494 aaKnown RBP23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 RUNDC3BQ96NL0 473 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 TGM7Q96PF1 710 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 DDA1Q9BW61 102 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 RNF14Q9UBS8 474 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 SSUH2Q9Y2M2 353 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 SDK2Q58EX2 2172 aa23.61■■□□□ 1.37
UBE2E3-213ENST00000602959 FAM237BA0A1B0GVD1 139 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 SLC5A10A0PJK1 596 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 MAGEB16A2A368 324 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 SDR42E2A6NKP2 422 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 EFCAB7A8K855 629 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 GOLGA8MH3BSY2 632 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 PRMT5O14744 637 aaPredicted RBP23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 VAPBO95292 243 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 RAB15P59190 212 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 CASC4Q6P4E1 433 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 FAM129CQ86XR2 697 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 ART4Q93070 314 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 SAMD15Q9P1V8 674 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 ASIC3Q9UHC3 531 aa23.6■■□□□ 1.37
UBE2E3-213ENST00000602959 OR5K3A6NET4 321 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 DNALI1O14645 258 aaPredicted RBP23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 PAMP19021 973 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 RPS3P23396 243 aaKnown RBP eCLIP23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 ARCN1P48444 511 aaKnown RBP23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 CLN3Q13286 438 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 TYSND1Q2T9J0 566 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 MRNIPQ6NTE8 343 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 IRGCQ6NXR0 463 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 SYDE1Q6ZW31 735 aaPredicted RBP23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 ACVR1CQ8NER5 493 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 PMEPA1Q969W9 287 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 CARD6Q9BX69 1037 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 TSSK1BQ9BXA7 367 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 P2RY12Q9H244 342 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 ZNF768Q9H5H4 540 aaKnown RBP23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 MVB12BQ9H7P6 319 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 SEMA5BQ9P283 1151 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 LHX6Q9UPM6 363 aa23.59■■□□□ 1.37
UBE2E3-213ENST00000602959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 CCDC188H7C350 402 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 KLK10O43240 276 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 ACADLP28330 430 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 MC2RQ01718 297 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 BOP1Q14137 746 aaKnown RBP23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 KRT33BQ14525 404 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 SYTL3Q4VX76 610 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 TMEM135Q86UB9 458 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 HOOK3Q86VS8 718 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 LRRC6Q86X45 466 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 TFGQ92734 400 aaPredicted RBP23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 FERD3LQ96RJ6 166 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 ASPSCR1Q9BZE9 553 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 FBXO8Q9NRD0 319 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 SIDT1Q9NXL6 827 aaKnown RBP23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 SLC39A1Q9NY26 324 aa23.58■■□□□ 1.37
UBE2E3-213ENST00000602959 IGSF10Q6WRI0 2623 aa23.58■■□□□ 1.36
UBE2E3-213ENST00000602959 LIPCP11150 499 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 OGNP20774 298 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 IVDP26440 423 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 PAFAH1B1P43034 410 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 PPP1CAP62136 330 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 ANKRD20A4Q4UJ75 823 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 RNF187Q5TA31 235 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 PCGF5Q86SE9 256 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 SDCCAG8Q86SQ7 713 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 OOSP2Q86WS3 158 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 KLHL7Q8IXQ5 586 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 AGGF1Q8N302 714 aaeCLIP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 C17orf53Q8N3J3 647 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 OTUD6BQ8N6M0 293 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 LKAAEAR1Q8TD35 194 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 KLHL6Q8WZ60 621 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 ZNF669Q96BR6 464 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 SIGLEC10Q96LC7 697 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 FCRL3Q96P31 734 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 TEFMQ96QE5 360 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 TCF12Q99081 682 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 CD180Q99467 661 aa23.57■■□□□ 1.36
UBE2E3-213ENST00000602959 TRIM56Q9BRZ2 755 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms