RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GSTM1P09488 218 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ANKRD34CP0C6C1 535 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 NMBRP28336 390 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 CD151P48509 253 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ARL4DP49703 201 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ATP1A2P50993 1020 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 GNG11P61952 73 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 GSTM4Q03013 218 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ACVR1Q04771 509 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 PRKAA1Q13131 559 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 RPA4Q13156 261 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 PRKG2Q13237 762 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 XKR5Q6UX68 686 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ZNF534Q76KX8 674 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 VASH2Q86V25 355 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 IL22RA1Q8N6P7 574 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 BMPERQ8N8U9 685 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ACTRT1Q8TDG2 376 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 LCN9Q8WX39 176 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 TFGQ92734 400 aaPredicted RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 PEX13Q92968 403 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 ELMO2Q96JJ3 720 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 TEFMQ96QE5 360 aaKnown RBP11.78□□□□□ -0.52
TPM4-212ENST00000590180 ZPBPQ9BS86 351 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 RAB33BQ9H082 229 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 KIR3DX1Q9H7L2 352 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 APMAPQ9HDC9 416 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 SYBUQ9NX95 663 aa11.78□□□□□ -0.52
TPM4-212ENST00000590180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 TEX51A0A1B0GUA7 166 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 OR5K3A6NET4 321 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 GOLGA8MH3BSY2 632 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 K7ENP7 123 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 LIN7AO14910 233 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 EFSO43281 561 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 AVILO75366 819 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 NDUFS3O75489 264 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 VAPBO95292 243 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 POLR2CP19387 275 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 PPP1CAP62136 330 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SH3BP2P78314 561 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 BOP1Q14137 746 aaKnown RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 SEMA3AQ14563 771 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 KCNJ11Q14654 390 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 CYP1B1Q16678 543 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SOWAHCQ53LP3 525 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 AARS2Q5JTZ9 985 aaKnown RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 INO80CQ6PI98 192 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 DTX1Q86Y01 620 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 CACNA2D3Q8IZS8 1091 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 ZSCAN1Q8NBB4 408 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 ACVR1CQ8NER5 493 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 GRK7Q8WTQ7 553 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 KLHL6Q8WZ60 621 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 UBXN4Q92575 508 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 NKD1Q969G9 470 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 RNF31Q96EP0 1072 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 MFSD3Q96ES6 412 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SGSM3Q96HU1 749 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 PDLIM2Q96JY6 352 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 OR6C1Q96RD1 312 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 UBL7Q96S82 380 aaPredicted RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 MAP3K3Q99759 626 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 KIFC1Q9BW19 673 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 OR52A5Q9H2C5 316 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SRMSQ9H3Y6 488 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 ZNF768Q9H5H4 540 aaKnown RBP11.77□□□□□ -0.53
TPM4-212ENST00000590180 MVB12BQ9H7P6 319 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 TREX1Q9NSU2 369 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 PIKFYVEQ9Y2I7 2098 aa11.77□□□□□ -0.53
TPM4-212ENST00000590180 ITPR1Q14643 2758 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 IGHV5-51A0A0C4DH38 117 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 GSAPA4D1B5 854 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 SDR42E2A6NKP2 422 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 IQCF5A8MTL0 148 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 RAD1O60671 282 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 PHF2O75151 1096 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 TCP1P17987 556 aaKnown RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 NELFEP18615 380 aaKnown RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 TTPAP49638 278 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 HSPA14Q0VDF9 509 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 TAF1BQ53T94 588 aaPredicted RBP11.76□□□□□ -0.53
TPM4-212ENST00000590180 ANKRD22Q5VYY1 191 aa11.76□□□□□ -0.53
TPM4-212ENST00000590180 KIAA1614Q5VZ46 1190 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms