RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 C6orf132Q5T0Z8 1188 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 TCEAL6Q6IPX3 200 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 ZCCHC8Q6NZY4 707 aaKnown RBP22.96■■□□□ 1.27
RAB40C-212ENST00000569575 IYDQ6PHW0 289 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 PAQR3Q6TCH7 311 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 UNC5DQ6UXZ4 953 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 RAPH1Q70E73 1250 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 PDZD3Q86UT5 571 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 SIDT2Q8NBJ9 832 aaKnown RBP22.96■■□□□ 1.27
RAB40C-212ENST00000569575 OR4C6Q8NH72 309 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 LKAAEAR1Q8TD35 194 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 MAGEC3Q8TD91 643 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 TCEAL3Q969E4 200 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 PGM2Q96G03 612 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 EDEM2Q9BV94 578 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 ACBD3Q9H3P7 528 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 ST14Q9Y5Y6 855 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 COLEC10Q9Y6Z7 277 aa22.96■■□□□ 1.27
RAB40C-212ENST00000569575 TLDC2A0PJX2 215 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 PDZK1P1A8MUH7 402 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 DYNC1I1O14576 645 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 ATP8B1O43520 1251 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 KDM1AO60341 852 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 WISP3O95389 354 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 ALDOAP04075 364 aaKnown RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 ITGB6P18564 788 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 SAT1P21673 171 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 GRK6P43250 576 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 ABCG1P45844 678 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 RPIAP49247 311 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 LIMK1P53667 647 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 ATP6V0D1P61421 351 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 C1orf61Q13536 156 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 SF3A2Q15428 464 aaKnown RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 KRT71Q3SY84 523 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 AASDHQ4L235 1098 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 TBC1D1Q86TI0 1168 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 CEP97Q8IW35 865 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 MYO1HQ8N1T3 1032 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 OR2W6PQ8NHA6 318 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 CCL4L1Q8NHW4 92 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 EPS8L3Q8TE67 593 aaKnown RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 UBXN10Q96LJ8 280 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 SMOC1Q9H4F8 434 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 STN1Q9H668 368 aaKnown RBP22.95■■□□□ 1.26
RAB40C-212ENST00000569575 MVB12BQ9H7P6 319 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 SNX15Q9NRS6 342 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 TBC1D29Q9UFV1 150 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 PLEKHM1Q9Y4G2 1056 aa22.95■■□□□ 1.26
RAB40C-212ENST00000569575 CDX4O14627 284 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-212ENST00000569575 SLC16A5O15375 505 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 MATN4O95460 622 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 MT-ND3P03897 115 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 KRT15P19012 456 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 ACADLP28330 430 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 CCNFP41002 786 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 SP140Q13342 867 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 CEP85LQ5SZL2 805 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 FAM83HQ6ZRV2 1179 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-212ENST00000569575 SLC9B2Q86UD5 537 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 C17orf82Q86X59 251 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-212ENST00000569575 PHC3Q8NDX5 983 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 GIMAP7Q8NHV1 300 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 ZDHHC1Q8WTX9 485 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 SH3KBP1Q96B97 665 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 DERL2Q9GZP9 239 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 IL21RQ9HBE5 538 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 PARD6AQ9NPB6 346 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 POLG2Q9UHN1 485 aa22.94■■□□□ 1.26
RAB40C-212ENST00000569575 ARHGEF17Q96PE2 2063 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-212ENST00000569575 SDC3O75056 442 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 C2P06681 752 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 C8GP07360 202 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 F7P08709 466 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-212ENST00000569575 MYZAPP0CAP1 466 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 SLCO1A2P46721 670 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 KPNA2P52292 529 aaKnown RBP22.93■■□□□ 1.26
RAB40C-212ENST00000569575 BMPR2Q13873 1038 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 FAM83EQ2M2I3 478 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 TSNAXIP1Q2TAA8 658 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 ACSBG2Q5FVE4 666 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 TTC23LQ6PF05 361 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 XKR5Q6UX68 686 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 SFRP1Q8N474 314 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 ARL10Q8N8L6 244 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 FBXO15Q8NCQ5 510 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-212ENST00000569575 ACVR1CQ8NER5 493 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 MZB1Q8WU39 189 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 NAT14Q8WUY8 206 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 TFGQ92734 400 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-212ENST00000569575 TSNARE1Q96NA8 513 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 NMRAL1Q9HBL8 299 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 FSCN3Q9NQT6 498 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 PRDM8Q9NQV8 689 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 POT1Q9NUX5 634 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 UCKL1Q9NWZ5 548 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 GALPQ9UBC7 116 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 TBK1Q9UHD2 729 aa22.93■■□□□ 1.26
RAB40C-212ENST00000569575 BPTFQ12830 3046 aa22.92■■□□□ 1.26
RAB40C-212ENST00000569575 A0A096LPK6 155 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms