RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MYH7P12883 1935 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 PTPRDP23468 1912 aa5.91□□□□□ -1.46
RTF1-204ENST00000558117 TRBV5-7A0A0A0MS05 114 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 ANTXRLA6NF34 631 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 HBP1O60381 514 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 SURF6O75683 361 aaKnown RBP5.9□□□□□ -1.46
RTF1-204ENST00000558117 CLDN1O95832 211 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 LCKP06239 509 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 TDO2P48775 406 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 CYP2J2P51589 502 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 CLCN3P51790 818 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 TEAD2Q15562 447 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 RUNDC3AQ59EK9 446 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 GPATCH4Q5T3I0 446 aaKnown RBP5.9□□□□□ -1.46
RTF1-204ENST00000558117 VWA5B1Q5TIE3 1220 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 FAM171A1Q5VUB5 890 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 TWF2Q6IBS0 349 aaKnown RBP5.9□□□□□ -1.46
RTF1-204ENST00000558117 KDELC2Q7Z4H8 507 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 GALNT7Q86SF2 657 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 MIB2Q96AX9 1013 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 ERP27Q96DN0 273 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 SLC25A18Q9H1K4 315 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 HPS4Q9NQG7 708 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 UPB1Q9UBR1 384 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 ADAM28Q9UKQ2 775 aa5.9□□□□□ -1.46
RTF1-204ENST00000558117 COL1A2P08123 1366 aa5.9□□□□□ -1.47
RTF1-204ENST00000558117 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 A0A1B0GVC2 190 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 HLA-DQA2P01906 255 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 POLR2MP0CAP2 368 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 U2AF2P26368 475 aaKnown RBP eCLIP5.89□□□□□ -1.47
RTF1-204ENST00000558117 OR1D2P34982 312 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 GPC3P51654 580 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 FOXG1P55316 489 aaPredicted RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 BYSLQ13895 437 aaKnown RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 HLA-BQ31612 363 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 CTXN3Q4LDR2 81 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 CBWD5Q5RIA9 395 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 CYP4A22Q5TCH4 519 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 AAGABQ6PD74 315 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 MAATS1Q7Z4T9 603 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 AACSQ86V21 672 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 IGFN1Q86VF2 1251 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 METTL13Q8N6R0 699 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 TRIML1Q8N9V2 468 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 ZNF564Q8TBZ8 553 aaPredicted RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 PPP1R10Q96QC0 940 aaKnown RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 P2RY13Q9BPV8 354 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 EIF2AK1Q9BQI3 630 aaKnown RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 GPR88Q9GZN0 384 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 CTDSP1Q9GZU7 261 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 FAM124BQ9H5Z6 455 aaPredicted RBP5.89□□□□□ -1.47
RTF1-204ENST00000558117 JMJD4Q9H9V9 463 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 PAG1Q9NWQ8 432 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 MIOSQ9NXC5 875 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 MMP17Q9ULZ9 603 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 TBX20Q9UMR3 447 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 CNTNAP2Q9UHC6 1331 aa5.89□□□□□ -1.47
RTF1-204ENST00000558117 EVPLQ92817 2033 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 IGKV6D-21A0A0A0MT36 114 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 J3KRW8 73 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 DHX16O60231 1041 aaKnown RBP5.88□□□□□ -1.47
RTF1-204ENST00000558117 MATKP42679 507 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 RXRGP48443 463 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 SLC26A2P50443 739 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 LINC00205P59089 165 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 ERVPABLB-1P60509 514 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 RUNX3Q13761 415 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 PKP1Q13835 747 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 AP5B1Q2VPB7 878 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 C5orf22Q49AR2 442 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 CCDC184Q52MB2 194 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 SH2D4BQ5SQS7 431 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 FHL5Q5TD97 284 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 CFAP161Q6P656 301 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 ZNF549Q6P9A3 640 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 FAM185AQ8N0U4 392 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 SLC25A41Q8N5S1 370 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 INPP5DQ92835 1189 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 TRIM63Q969Q1 353 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 PPM1MQ96MI6 270 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 CADM1Q9BY67 442 aaKnown RBP5.88□□□□□ -1.47
RTF1-204ENST00000558117 PNRC2Q9NPJ4 139 aaKnown RBP5.88□□□□□ -1.47
RTF1-204ENST00000558117 GKN1Q9NS71 199 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.88□□□□□ -1.47
RTF1-204ENST00000558117 ICKQ9UPZ9 632 aa5.88□□□□□ -1.47
RTF1-204ENST00000558117 PLXND1Q9Y4D7 1925 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 SDK2Q58EX2 2172 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 IKBKBO14920 756 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 RANBP6O60518 1105 aaKnown RBP5.87□□□□□ -1.47
RTF1-204ENST00000558117 CCNT1O60563 726 aaKnown RBP5.87□□□□□ -1.47
RTF1-204ENST00000558117 METTL18O95568 372 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 CKMT1AP12532 417 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 CPA1P15085 419 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 MAPK9P45984 424 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 POLD2P49005 469 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 PAPOLAP51003 745 aaKnown RBP5.87□□□□□ -1.47
RTF1-204ENST00000558117 MYBPC2Q14324 1141 aa5.87□□□□□ -1.47
RTF1-204ENST00000558117 STXBP5Q5T5C0 1151 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms