RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZBTB43O43298 467 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 HCRTR2O43614 444 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 GPR137BO60478 399 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 ZFAND5O76080 213 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 CSPG5O95196 566 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 GCNT3O95395 438 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 SPARCP09486 303 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 FAM157CP0CG43 387 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 MFAP5Q13361 173 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 DHX8Q14562 1220 aaKnown RBP3.72□□□□□ -1.81
VRK1-207ENST00000557352 NAB2Q15742 525 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 GTDC1Q4AE62 458 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 ALS2CLQ60I27 953 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 CYP20A1Q6UW02 462 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 ISCA2Q86U28 154 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 PLD3Q8IV08 490 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 ZNF843Q8N446 348 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 MYRIPQ8NFW9 859 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 OR2T6Q8NHC8 308 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 MORC4Q8TE76 937 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 SLC47A1Q96FL8 570 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 PERPQ96FX8 193 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 WDFY2Q96P53 400 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 MCRIP2Q9BUT9 160 aaKnown RBP3.72□□□□□ -1.81
VRK1-207ENST00000557352 SEMA6AQ9H2E6 1030 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 RRP7BPQ9NSQ0 103 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 COQ3Q9NZJ6 369 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 PDP2Q9P2J9 529 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 CRYL1Q9Y2S2 319 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 CLTCL1P53675 1640 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 UHRF1BP1Q6BDS2 1440 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 A6NLC8 198 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 J3QR06 171 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 PLK4O00444 970 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 SMAD9O15198 467 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 TPD52L2O43399 206 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 DCXO43602 365 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 NDUFS3O75489 264 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 NGFP01138 241 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 TPOP07202 933 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 HMBSP08397 361 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 RGS2P41220 211 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 WNT5AP41221 380 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 THOP1P52888 689 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 PPARDQ03181 441 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 MVPQ14764 893 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 ZNF534Q76KX8 674 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 FASTKD5Q7L8L6 764 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 R3HCC1LQ7Z5L2 792 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 CEP97Q8IW35 865 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 SCML4Q8N228 414 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 MRGPRDQ8TDS7 321 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 SEMA4DQ92854 862 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 RBM4BQ9BQ04 359 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 SYT11Q9BT88 431 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 CABLES2Q9BTV7 478 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 PREBQ9HCU5 417 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 TRMT1Q9NXH9 659 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 KLHL8Q9P2G9 620 aaPredicted RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 EXOGQ9Y2C4 368 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 RABGAP1Q9Y3P9 1069 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 NUP155O75694 1391 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 KANK1Q14678 1352 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 IQGAP1P46940 1657 aa3.71□□□□□ -1.82
VRK1-207ENST00000557352 CLTCQ00610 1675 aaKnown RBP3.71□□□□□ -1.82
VRK1-207ENST00000557352 ADGRB3O60242 1522 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 MADDQ8WXG6 1647 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 A0A1W2PPH5 198 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 SLCO1B7G3V0H7 640 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TMEM189-UBE2V1I3L0A0 370 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 EIF3JO75822 258 aaKnown RBP3.7□□□□□ -1.82
VRK1-207ENST00000557352 FRMD6-AS1P0C7T7 363 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 CKMT2P17540 419 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TYMPP19971 482 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 CBLP22681 906 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 ACADLP28330 430 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TFAP4Q01664 338 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TCTE1Q5JU00 501 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 SPINK14Q6IE38 97 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 SUSD1Q6UWL2 747 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 METTL7BQ6UX53 244 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TPRG1Q6ZUI0 275 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 ZNF611Q8N823 705 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 GSDMBQ8TAX9 411 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TRPC4APQ8TEL6 797 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 FAM222BQ8WU58 562 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TMEM143Q96AN5 459 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 GIMAP5Q96F15 307 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 IWS1Q96ST2 819 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 MBNL1Q9NR56 388 aaKnown RBP3.7□□□□□ -1.82
VRK1-207ENST00000557352 PLCXD1Q9NUJ7 323 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 ASIC3Q9UHC3 531 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 TSPYL4Q9UJ04 414 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 PLA2R1Q13018 1463 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 CNTLNQ9NXG0 1405 aa3.7□□□□□ -1.82
VRK1-207ENST00000557352 SYNMO15061 1565 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms