RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ACTR3BQ9P1U1 418 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 POLR3HQ9Y535 204 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 IGSF1Q8N6C5 1336 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 INO80Q9ULG1 1556 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CCRL2O00421 344 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DLGAP1O14490 977 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CAPN3P20807 821 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CDKN2CP42773 168 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 RPP30P78346 268 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 BMPR2Q13873 1038 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CYB5R4Q7L1T6 521 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 FAM131BQ86XD5 332 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 RBM18Q96H35 190 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 LRTM1Q9HBL6 345 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CPNE3O75131 537 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 C10orf62Q5T681 223 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 RPL13AP3Q6NVV1 102 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 C16orf86Q6ZW13 317 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 UROC1Q96N76 676 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TSPAN15O95858 294 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CD40LGP29965 261 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC26A5P58743 744 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC30A6Q6NXT4 461 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 MSANTD2Q6P1R3 559 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TREML1Q86YW5 311 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 USP20Q9Y2K6 914 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF407Q9C0G0 2248 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 IFNGR1P15260 489 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TFEBP19484 476 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TAS2R50P59544 299 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC6A3Q01959 620 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DPYSL3Q14195 570 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ARL6IP1Q15041 203 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SPIN3Q5JUX0 258 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZPBP2Q6X784 338 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PCDHGA8Q9Y5G5 932 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF705EA8MWA4 302 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CRHR1P34998 444 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 VSX2P58304 361 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ARSJQ5FYB0 599 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PTGR2Q8N8N7 351 aaPredicted RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TARS2Q9BW92 718 aaKnown RBP8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 PP2D1A8MPX8 630 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TUBG1P23258 451 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SMARCD3Q6STE5 483 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 FAM84AQ96KN4 292 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SLC5A7Q9GZV3 580 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 RNF181Q9P0P0 153 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 ZDBF2Q9HCK1 2354 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 SULT1C2O00338 296 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 VILLO15195 856 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 CCNB1P14635 433 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 DNAAF1Q8NEP3 725 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 HIPK3Q9H422 1215 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
SYNE3-205ENST00000557275 TRAV19A0A0A6YYK7 116 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 HCRTR2O43614 444 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 UNC5BQ8IZJ1 945 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 MFSD14AQ96MC6 490 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 TWNKQ96RR1 684 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 PCDHB18PQ96TA0 734 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 EIF5A2Q9GZV4 153 aaKnown RBP8.71□□□□□ -1.01
SYNE3-205ENST00000557275 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.71□□□□□ -1.01
SYNE3-205ENST00000557275 BRD7Q9NPI1 651 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 ATP6V1G2-DDX39BF2Z307 99 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 MATN4O95460 622 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 ICAM1P05362 532 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 RAP2AP10114 183 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 TAS2R31P59538 309 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 FADDQ13158 208 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 MFSD5Q6N075 450 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 C7orf26Q96N11 449 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 TRAPPC13A5PLN9 417 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 TBX1O43435 398 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 INMTO95050 263 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 CCNHP51946 323 aaPredicted RBP8.71□□□□□ -1.01
SYNE3-205ENST00000557275 DCST2Q5T1A1 773 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 C9orf64Q5T6V5 341 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 SMIM15Q7Z3B0 74 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 GALNT12Q8IXK2 581 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 ZFP3Q96NJ6 502 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 UNC93B1Q9H1C4 597 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 LRRN3E7EW58 273 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 UQCRC1P31930 480 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 CCKBRP32239 447 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 SMSP52788 366 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 SNTA1Q13424 505 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 C2orf76Q3KRA6 126 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 LRRN3Q9H3W5 708 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 USP42Q9H9J4 1324 aaKnown RBP8.71□□□□□ -1.01
SYNE3-205ENST00000557275 CHD1O14646 1710 aa8.71□□□□□ -1.01
SYNE3-205ENST00000557275 E2F3O00716 465 aa8.71□□□□□ -1.02
SYNE3-205ENST00000557275 SHOXO15266 292 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms