RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 GCATO75600 419 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 DNAJB5O75953 348 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 MOCS2O96007 188 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 APOEP02649 317 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 VDRP11473 427 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 KRT13P13646 458 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 HGFP14210 728 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CD19P15391 556 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 PDGFRAP16234 1089 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 TSHRP16473 764 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 WT1P19544 449 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 BLKP51451 505 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CHN2P52757 468 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CCL7P80098 99 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 ZFP36L1Q07352 338 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 STK4Q13043 487 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 EIF2B5Q13144 721 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 C1orf61Q13536 156 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 FHL2Q14192 279 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 HABP2Q14520 560 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 DRAP1Q14919 205 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 RABEP1Q15276 862 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 METRNLQ641Q3 311 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 KRT39Q6A163 491 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 HIST2H2BCQ6DN03 193 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 KIAA1161Q6NSJ0 714 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 LVRNQ6Q4G3 990 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 LCLAT1Q6UWP7 414 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF783Q6ZMS7 281 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 BEND5Q7L4P6 421 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF627Q7L945 461 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CHSY1Q86X52 802 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CCAR2Q8N163 923 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 SDR16C5Q8N3Y7 309 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 FITM2Q8N6M3 262 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 AOPEPQ8N6M6 819 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 DQX1Q8TE96 717 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 SLC35F5Q8WV83 523 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 ASB12Q8WXK4 309 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 SCAMP4Q969E2 229 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 NMD3Q96D46 503 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 ALG14Q96F25 216 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 PPP1R16AQ96I34 528 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 PPP1R13BQ96KQ4 1090 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 BTN2A3PQ96KV6 586 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CCDC114Q96M63 670 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CATSPER2Q96P56 530 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 VKORC1Q9BQB6 163 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 UNKQ9C0B0 810 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 BLZF1Q9H2G9 400 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 LRRN3Q9H3W5 708 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 SYNDIG1Q9H7V2 258 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 PLCB1Q9NQ66 1216 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 MRPS18AQ9NVS2 196 aaKnown RBP4.9□□□□□ -1.63
ATXN3-228ENST00000554592 RAB20Q9NX57 234 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 PTPN13Q12923 2485 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 CKAP5Q14008 2032 aa4.9□□□□□ -1.63
ATXN3-228ENST00000554592 MYH11P35749 1972 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PRAMEF33A0A0G2JMD5 474 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 A0A1W2PQM1 296 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 VPS37CA5D8V6 355 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 D6RAR5 112 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 STMND1H3BQB6 276 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 O00370 1275 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TOR1BO14657 336 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RAD51BO15315 384 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 STX10O60499 249 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FAM20BO75063 409 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PPP6R2O75170 966 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 UNC5CO95185 931 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RPLP0P05388 317 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FYNP06241 537 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 CTSLP07711 333 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 SLC2A3P11169 496 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 KRT4P19013 534 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TNFSF4P23510 183 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 MGAT1P26572 445 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 CASP1P29466 404 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PSMC2P35998 433 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ANP32AP39687 249 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 STT3AP46977 705 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RGS7P49802 495 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF135P52742 658 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 THOP1P52888 689 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 HMGA2P52926 109 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 MAPK10P53779 464 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RIPPLY3P57055 190 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PFN3P60673 137 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 YWHAEP62258 255 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 YPEL5P62699 121 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 KRT83P78385 493 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 SLC13A2Q13183 592 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 CTBP1Q13363 440 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 CUL4BQ13620 913 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 DAG1Q14118 895 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms