RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	SLC5A10	A0PJK1	596 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	AP3B1	O00203	1094 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	VAPB	O95292	243 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CCR7	P32248	378 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	MAGEA3	P43357	314 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SEPHS1	P49903	392 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CSE1L	P55060	971 aa	Known RBP	12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SH3BP2	P78314	561 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	BOP1	Q14137	746 aa	Known RBP	12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	PPP1R7	Q15435	360 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	LYPLAL1	Q5VWZ2	237 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	ANKS6	Q68DC2	871 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CASC4	Q6P4E1	433 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CERS6	Q6ZMG9	384 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	PDZD3	Q86UT5	571 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	VRK3	Q8IV63	474 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SPNS2	Q8IVW8	549 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	KLHL7	Q8IXQ5	586 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	KRT222	Q8N1A0	295 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	MCU	Q8NE86	351 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	GRK7	Q8WTQ7	553 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	PPM1M	Q96MI6	270 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	FERD3L	Q96RJ6	166 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	PRORY	Q9H606	182 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	KIR3DX1	Q9H7L2	352 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	VPS37B	Q9H9H4	285 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CPNE5	Q9HCH3	593 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SIDT1	Q9NXL6	827 aa	Known RBP	12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SLC39A1	Q9NY26	324 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	ACSL6	Q9UKU0	697 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	SAR1B	Q9Y6B6	198 aa		12.83	□□□□□ -0.36
PRKDC-206	ENST00000536429	CTAGE9	A4FU28	777 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR6C74	A6NCV1	312 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429		B4E171	279 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	EFS	O43281	561 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	BANF1	O75531	89 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	FTH1	P02794	183 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	ANKRD34C	P0C6C1	535 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR56A5	P0C7T3	313 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	IVD	P26440	423 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	ACADL	P28330	430 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	TSPAN7	P41732	249 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	SARNP	P82979	210 aa	Known RBP	12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	MC2R	Q01718	297 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	RPA4	Q13156	261 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	PRKG2	Q13237	762 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	PTK6	Q13882	451 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	CACHD1	Q5VU97	1274 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	FBXO38	Q6PIJ6	1188 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	PRSS42	Q7Z5A4	293 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR4E2	Q8NGC2	313 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR5AR1	Q8NGP9	310 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	TAAR9	Q96RI9	348 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	HGH1	Q9BTY7	390 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	DPH1	Q9BZG8	443 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	P2RY12	Q9H244	342 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	XKR8	Q9H6D3	395 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	WDR70	Q9NW82	654 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	HRASLS2	Q9NWW9	162 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	EPHA6	Q9UF33	1036 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	ASIC3	Q9UHC3	531 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	PCYOX1	Q9UHG3	505 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	SSUH2	Q9Y2M2	353 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	PCDHGA3	Q9Y5H0	932 aa		12.82	□□□□□ -0.36
PRKDC-206	ENST00000536429	IGHV5-51	A0A0C4DH38	117 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR5K3	A6NET4	321 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	SDR42E2	A6NKP2	422 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	IFRD1	O00458	451 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	DNALI1	O14645	258 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	PRMT5	O14744	637 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	LIN7A	O14910	233 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	RASSF9	O75901	435 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	MLN	P12872	115 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	CD151	P48509	253 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	CXADR	P78310	365 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	MRPS25	P82663	173 aa	Known RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	KRT33B	Q14525	404 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ANKRD20A4	Q4UJ75	823 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	SYTL3	Q4VX76	610 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZNF789	Q5FWF6	425 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	AARS2	Q5JTZ9	985 aa	Known RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	CTSL3P	Q5NE16	218 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	VASH2	Q86V25	355 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	DTX1	Q86Y01	620 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	PPIL6	Q8IXY8	311 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	OTUD6B	Q8N6M0	293 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	OR52E1	Q8NGJ3	308 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	KLHL6	Q8WZ60	621 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	TFG	Q92734	400 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	SLCO2A1	Q92959	643 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZNF669	Q96BR6	464 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	ZDHHC12	Q96GR4	267 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	SIGLEC10	Q96LC7	697 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	PWWP2A	Q96N64	755 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	TTC1	Q99614	292 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	MAP3K3	Q99759	626 aa		12.81	□□□□□ -0.36
PRKDC-206	ENST00000536429	TRIM51	Q9BSJ1	452 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms