RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 LIX1LQ8IVB5 337 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ADHFE1Q8IWW8 467 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MICU2Q8IYU8 434 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PARP16Q8N5Y8 322 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 TOP6BLQ8N6T0 577 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PNPLA1Q8N8W4 532 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 B3GALNT2Q8NCR0 500 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 IPCEF1Q8WWN9 437 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 FCGR1BQ92637 280 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PROX1Q92786 737 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 POP5Q969H6 163 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SDCCAG3Q96C92 435 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CLIP3Q96DZ5 547 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 IMP4Q96G21 291 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 C1orf74Q96LT6 269 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF560Q96MR9 790 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RAD9AQ99638 391 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 BARD1Q99728 777 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SMOQ99835 787 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 COLEC11Q9BWP8 271 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SLA2Q9H6Q3 261 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MARCH7Q9H992 704 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF408Q9H9D4 720 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCNB1IP1Q9NPC3 277 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CNGB3Q9NQW8 809 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PLCXD1Q9NUJ7 323 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 DCAF13Q9NV06 445 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HOXC10Q9NYD6 342 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 EVLQ9UI08 416 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PCTPQ9UKL6 214 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RIMKLBQ9ULI2 386 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 NDRG4Q9ULP0 352 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 UBQLN1Q9UMX0 589 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 INVSQ9Y283 1065 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CARD8Q9Y2G2 431 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 AP3M1Q9Y2T2 418 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MED16Q9Y2X0 877 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PKP3Q9Y446 797 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCL27Q9Y4X3 112 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ANKRD36A6QL64 1941 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CITO14578 2027 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 HMX3A6NHT5 357 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 H3BQ06 376 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CXCR6O00574 342 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ARHGAP33O14559 1287 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 RAD51BO15315 384 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 LDB2O43679 373 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 SSX4O60224 188 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 HS6ST1O60243 411 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 SNX2O60749 519 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 PMPCBO75439 489 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ECI2O75521 394 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CNMDO75829 334 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CCNKO75909 580 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CD4P01730 458 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 FTH1P02794 183 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 S100BP04271 92 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ATXN1LP0C7T5 689 aaKnown RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 KCNE1P15382 129 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 MSH3P20585 1137 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 OGNP20774 298 aaKnown RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ENDOUP21128 410 aaKnown RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 PSMB9P28065 219 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 SOX11P35716 441 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 LIPAP38571 399 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 KRT6CP48668 564 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 PXNP49023 591 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 SERPINH1P50454 418 aaKnown RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 DAPP51397 102 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 GNG2P59768 71 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 IL5RAQ01344 420 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CXCL9Q07325 125 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CYP4F3Q08477 520 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TRAF3Q13114 568 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 PRKG2Q13237 762 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 IRF3Q14653 427 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TRIP4Q15650 581 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 PFKFB4Q16877 469 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TYSND1Q2T9J0 566 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 Q5BKY6 102 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 FBXO47Q5MNV8 452 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TPRG1LQ5T0D9 272 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CCNJQ5T5M9 372 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 NBPF12Q5TAG4 269 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 CPZQ66K79 652 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ATG9BQ674R7 924 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 KDM4DQ6B0I6 523 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 KIAA1841Q6NSI8 718 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ERAP2Q6P179 960 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 C19orf48Q6RUI8 117 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 RNF165Q6ZSG1 346 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 ARMCX6Q7L4S7 300 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TAS2R42Q7RTR8 314 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 GPRIN1Q7Z2K8 1008 aa6.81□□□□□ -1.32
CPSF7-215ENST00000536145 LDB1Q86U70 411 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-215ENST00000536145 TAC4Q86UU9 113 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms